Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741442 . C A CCDS14659.1:NM_000074.2:c.654tgC>tgA_NP_000065.1:p.218C>* Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 CYS A:103 A:218 81.0 0.6 S -5.5 77.4 80.0 0.593 0.007 A:P29965:0.007
 HOH
 2.328
 O
 H1
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 CYS A:103 A:218 47.0 0.348 -148.4 155.9 16.0 0.119 0.229 D:None:0.23
CYS B:103 B:218 44.0 0.326 -150.9 155.1 14.0 0.104 0.222 F:None:0.222
CYS C:103 C:218 46.0 0.341 -150.2 150.5 14.0 0.104 0.237 H:None:0.237
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 CYS A:103 A:218 45.0 0.333 -159.0 160.3 15.0 0.111 0.222 D:None:0.222
 TRS
TMO
HOH
 9.672
3.329
3.826
 C
O
CB
 O1
CAA
O
CYS B:103 B:218 45.0 0.333 -155.7 162.9 14.0 0.104 0.229 F:None:0.23
 TMO
HOH
 4.092
3.854
 SG
O
 OAE
O
CYS C:103 C:218 49.0 0.363 -153.8 160.4 16.0 0.119 0.244 H:None:0.244
 TMO
HOH
 3.185
4.014
 O
O
 CAB
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 CYS A:103 A:218 51.0 0.378 -157.8 150.1 19.0 0.141 0.237 D:None:0.237
 HOH
 3.638
 O
 O
CYS B:103 B:218 48.0 0.356 -155.8 158.4 18.0 0.133 0.223 F:None:0.222
 HOH
 3.895
 O
 O
CYS C:103 C:218 47.0 0.348 -152.5 155.9 16.0 0.119 0.229 H:None:0.23
 HOH
 3.834
 O
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 CYS A:106 A:218 26.0 0.193 -173.7 -35.3 26.0 0.193 0.0
CYS B:106 B:218 37.0 0.274 S -154.5 -10.8 9.0 0.067 0.207 G:P25942:0.207
CYS C:106 C:218 35.0 0.259 -148.3 -46.7 6.0 0.044 0.215 H:P25942:0.215
CYS D:106 D:218 31.0 0.23 179.4 -0.1 NA NA NA
CYS E:106 E:218 32.0 0.237 -157.5 -32.3 NA NA NA
CYS F:106 F:218 31.0 0.23 -164.2 -10.7 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 CYS A:99 A:218 40.0 0.296 -156.3 168.3 15.0 0.111 0.185 B:None:0.185
 HOH
 4.874
 CB
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 CYS A:98 A:218 63.0 0.467 S -109.0 156.8 60.0 0.444 0.023 B:P29965:0.022
 HOH
 4.593
 SG
 O
CYS B:98 B:218 42.0 0.311 S -112.6 -47.8 42.0 0.311 0.0 HOH
 8.094
 SG
 O
CYS C:98 C:218 97.0 0.719 -140.8 47.2 97.0 0.719 0.0 HOH
 7.983
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 CYS A:218 A:218 48.0 0.356 -152.1 157.3