Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741446 . C A CCDS14659.1:NM_000074.2:c.658Caa>Aaa_NP_000065.1:p.220Q>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLN A:105 A:220 105.0 0.583 E -82.8 120.6 37.0 0.206 0.377 A:P29965:0.378
 HOH
 2.014
 OE1
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLN A:105 A:220 98.0 0.544 E -69.5 162.4 22.0 0.122 0.422 D:None:0.061
B:P29965:0.361
GLN B:105 B:220 90.0 0.5 E -74.8 164.8 22.0 0.122 0.378 C:P29965:0.333
F:None:0.044
GLN C:105 C:220 94.0 0.522 E -71.9 161.9 22.0 0.122 0.4 A:P29965:0.344
H:None:0.056
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLN A:105 A:220 95.0 0.528 E -80.4 140.4 17.0 0.094 0.434 D:None:0.072
B:P29965:0.361
 TRS
TMO
HOH
 6.902
3.755
2.514
 O
OE1
OE1
 O3
OAE
O
GLN B:105 B:220 96.0 0.533 E -84.1 135.4 17.0 0.094 0.439 C:P29965:0.367
F:None:0.072
 TRS
TMO
HOH
 7.273
3.754
2.616
 O
OE1
OE1
 O2
CAA
O
GLN C:105 C:220 93.0 0.517 E -81.7 138.6 17.0 0.094 0.423 A:P29965:0.35
H:None:0.067
 TRS
TMO
HOH
 7.191
3.596
2.525
 O
OE1
OE1
 N
CAD
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLN A:105 A:220 96.0 0.533 E -80.4 140.1 18.0 0.1 0.433 D:None:0.078
B:P29965:0.356
 HOH
 2.428
 OE1
 O
GLN B:105 B:220 93.0 0.517 E -83.6 138.0 17.0 0.094 0.423 C:P29965:0.356
F:None:0.067
 HOH
 2.534
 OE1
 O
GLN C:105 C:220 94.0 0.522 E -85.5 143.1 18.0 0.1 0.422 A:P29965:0.356
H:None:0.067
 HOH
 2.661
 OE1
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLN A:108 A:220 101.0 0.561 E -73.5 141.3 54.0 0.3 0.261 B:P29965:0.261
GLN B:108 B:220 103.0 0.572 E -94.0 151.0 24.0 0.133 0.439 C:P29965:0.306
G:P25942:0.139
GLN C:108 C:220 90.0 0.5 E -52.7 166.3 19.0 0.106 0.394 A:P29965:0.261
H:P25942:0.133
GLN D:108 D:220 77.0 0.428 -59.3 -175.4 NA NA NA
GLN E:108 E:220 93.0 0.517 E -70.3 156.4 NA NA NA
GLN F:108 F:220 101.0 0.561 E -65.9 165.3 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLN A:101 A:220 145.0 0.806 E -84.7 136.8 1.0 0.006 0.8 B:None:0.389
A:P29965:0.539
 HOH
 8.744
 O
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLN A:100 A:220 99.0 0.55 -52.2 118.4 40.0 0.222 0.328 B:P29965:0.328
 NAG
HOH
 9.228
3.922
 OE1
NE2
 C8
O
GLN B:100 B:220 95.0 0.528 E -60.7 138.7 41.0 0.228 0.3 C:P29965:0.3
 NAG
HOH
 9.557
3.991
 OE1
NE2
 C8
O
GLN C:100 C:220 84.0 0.467 -58.9 122.1 84.0 0.467 0.0 HOH
 4.072
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLN A:220 A:220 116.0 0.644 E -78.6 134.6