Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741449 . C A CCDS14659.1:NM_000074.2:c.661Caa>Aaa_NP_000065.1:p.221Q>K Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLN A:106 A:221 49.0 0.272 E -131.3 149.8 23.0 0.128 0.144 A:P29965:0.122
A:P29965:0.022
 HOH
 2.208
 HE22
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLN A:106 A:221 51.0 0.283 E -160.7 142.2 9.0 0.05 0.233 C:P29965:0.056
B:P29965:0.194
GLN B:106 B:221 51.0 0.283 E -163.4 138.5 10.0 0.056 0.227 C:P29965:0.189
A:P29965:0.056
GLN C:106 C:221 52.0 0.289 E -157.8 140.4 10.0 0.056 0.233 A:P29965:0.194
B:P29965:0.056
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLN A:106 A:221 58.0 0.322 E -142.5 154.0 8.0 0.044 0.278 C:P29965:0.017
B:P29965:0.261
 TRS
TMO
HOH
 3.540
8.159
2.964
 NE2
N
NE2
 N
OAE
O
GLN B:106 B:221 86.0 0.478 E -142.4 153.0 12.0 0.067 0.411 C:P29965:0.378
A:P29965:0.056
 TMO
HOH
 7.887
5.902
 N
N
 CAA
O
GLN C:106 C:221 60.0 0.333 E -142.4 153.4 5.0 0.028 0.305 A:P29965:0.306
B:P29965:0.006
 TRS
TMO
HOH
 3.519
8.106
3.021
 NE2
N
NE2
 N
CAD
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLN A:106 A:221 66.0 0.367 E -141.1 155.6 8.0 0.044 0.323 C:P29965:0.011
B:P29965:0.311
 HOH
 2.891
 NE2
 O
GLN B:106 B:221 63.0 0.35 E -132.2 154.4 7.0 0.039 0.311 C:P29965:0.267
A:P29965:0.039
 HOH
 3.009
 OE1
 O
GLN C:106 C:221 70.0 0.389 E -145.3 150.3 7.0 0.039 0.35 A:P29965:0.35
 HOH
 3.591
 CG
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLN A:109 A:221 50.0 0.278 E -141.5 140.2 12.0 0.067 0.211 C:P29965:0.006
B:P29965:0.206
GLN B:109 B:221 54.0 0.3 E -149.7 137.7 10.0 0.056 0.244 C:P29965:0.228
A:P29965:0.017
GLN C:109 C:221 55.0 0.306 E -166.1 138.3 8.0 0.044 0.262 A:P29965:0.244
B:P29965:0.017
GLN D:109 D:221 58.0 0.322 -180.0 135.2 NA NA NA
GLN E:109 E:221 55.0 0.306 E -146.5 138.0 NA NA NA
GLN F:109 F:221 62.0 0.344 E -168.9 142.8 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLN A:102 A:221 53.0 0.294 E -154.8 154.9 21.0 0.117 0.177 A:P29965:0.028
A:P29965:0.15
 HOH
 7.479
 NE2
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLN A:101 A:221 96.0 0.533 E -136.2 144.6 26.0 0.144 0.389 B:P29965:0.389
 HOH
 4.829
 OE1
 O
GLN B:101 B:221 88.0 0.489 E -141.3 140.3 17.0 0.094 0.395 C:P29965:0.394
 HOH
 6.469
 NE2
 O
GLN C:101 C:221 70.0 0.389 E -137.9 179.3 66.0 0.367 0.022 A:P29965:0.022
 HOH
 5.522
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLN A:221 A:221 46.0 0.256 E -141.5 151.5