Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741491 . G A CCDS14659.1:NM_000074.2:c.703Gct>Act_NP_000065.1:p.235A>T Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 ALA A:120 A:235 0.0 0.0 B 98.1 -111.3 0.0 0.0 0.0 HOH
 3.547
 O
 O
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 ALA A:120 A:235 0.0 0.0 -57.2 155.4 0.0 0.0 0.0
ALA B:120 B:235 0.0 0.0 -57.5 150.2 0.0 0.0 0.0
ALA C:120 C:235 0.0 0.0 -53.2 154.5 0.0 0.0 0.0
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 ALA A:120 A:235 0.0 0.0 -71.1 149.9 0.0 0.0 0.0 PEG
ETE
HOH
 7.535
9.605
3.784
 C
N
CA
 C1
OH6
O
ALA B:120 B:235 0.0 0.0 -70.8 151.9 0.0 0.0 0.0 PEG
ETE
HOH
 7.287
9.780
3.785
 C
N
CB
 C1
OH2
O
ALA C:120 C:235 1.0 0.009 -71.3 150.1 1.0 0.009 0.0 PEG
1PE
HOH
 7.774
9.050
3.745
 C
N
CB
 O1
C16
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 ALA A:120 A:235 0.0 0.0 -67.9 148.1 0.0 0.0 0.0 HOH
 3.856
 CA
 O
ALA B:120 B:235 0.0 0.0 -70.3 150.5 0.0 0.0 0.0 HOH
 3.705
 C
 O
ALA C:120 C:235 0.0 0.0 -63.8 148.2 0.0 0.0 0.0 HOH
 3.663
 C
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 ALA A:123 A:235 0.0 0.0 -76.2 146.2 0.0 0.0 0.0
ALA B:123 B:235 0.0 0.0 -79.2 145.0 0.0 0.0 0.0
ALA C:123 C:235 0.0 0.0 -78.9 143.0 0.0 0.0 0.0
ALA D:123 D:235 0.0 0.0 -77.6 146.0 NA NA NA
ALA E:123 E:235 0.0 0.0 -85.0 145.0 NA NA NA
ALA F:123 F:235 0.0 0.0 -80.1 143.6 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 ALA A:116 A:235 0.0 0.0 -79.7 141.4 0.0 0.0 0.0 HOH
 3.978
 CA
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 ALA A:115 A:235 0.0 0.0 -58.7 148.2 0.0 0.0 0.0 HOH
 6.803
 N
 O
ALA B:115 B:235 0.0 0.0 -59.9 137.2 0.0 0.0 0.0 HOH
 3.679
 CA
 O
ALA C:115 C:235 4.0 0.035 -75.5 144.9 4.0 0.035 0.0 HOH
 2.399
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 ALA A:235 A:235 0.0 0.0 -72.1 139.2