Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 135741555 | . | T | A | CCDS14659.1:NM_000074.2:c.767tTt>tAt_NP_000065.1:p.256F>Y | Homo sapiens CD40 ligand (CD40LG), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1aly | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
1997-09-17 | PHE | A:141 | A:256 | 0.0 | 0.0 | E | -157.2 | 140.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.062 |
N |
H1 |
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| 1i9r | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2002-03-20 | PHE | A:141 | A:256 | 0.0 | 0.0 | E | -156.1 | 146.7 | 0.0 | 0.0 | 0.0 | ||||||
| PHE | B:141 | B:256 | 0.0 | 0.0 | E | -161.3 | 145.9 | 0.0 | 0.0 | 0.0 | |||||||||||||
| PHE | C:141 | C:256 | 0.0 | 0.0 | E | -159.2 | 140.6 | 0.0 | 0.0 | 0.0 | |||||||||||||
| 6w9g | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2020-12-23 | PHE | A:141 | A:256 | 0.0 | 0.0 | E | -153.7 | 137.8 | 0.0 | 0.0 | 0.0 |
PEG HOH |
9.419 4.435 |
CE2 CE2 |
C3 O |
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| PHE | B:141 | B:256 | 0.0 | 0.0 | E | -153.0 | 135.4 | 0.0 | 0.0 | 0.0 |
PEG HOH |
9.358 4.371 |
CE2 CE2 |
C4 O |
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| PHE | C:141 | C:256 | 0.0 | 0.0 | E | -154.4 | 133.2 | 0.0 | 0.0 | 0.0 |
PEG HOH |
9.490 4.386 |
CE2 CE2 |
O2 O |
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| 7sgm | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2022-02-02 | PHE | A:141 | A:256 | 0.0 | 0.0 | E | -156.7 | 132.5 | 0.0 | 0.0 | 0.0 |
HOH |
4.433 |
CE2 |
O |
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| PHE | B:141 | B:256 | 0.0 | 0.0 | E | -155.3 | 133.7 | 0.0 | 0.0 | 0.0 |
HOH |
4.543 |
CE2 |
O |
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| PHE | C:141 | C:256 | 0.0 | 0.0 | E | -148.2 | 136.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.484 |
CE2 |
O |
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| 3qd6 | 1 | P29965 | 100.0 | 1e-106 |
X-RAY |
2011-02-02 | PHE | A:144 | A:256 | 0.0 | 0.0 | E | -160.2 | 137.2 | 0.0 | 0.0 | 0.0 | ||||||
| PHE | B:144 | B:256 | 0.0 | 0.0 | E | -159.2 | 135.6 | 0.0 | 0.0 | 0.0 | |||||||||||||
| PHE | C:144 | C:256 | 0.0 | 0.0 | E | -157.2 | 140.1 | 0.0 | 0.0 | 0.0 | |||||||||||||
| PHE | D:144 | D:256 | 0.0 | 0.0 | E | -159.8 | 133.9 | NA | NA | NA | |||||||||||||
| PHE | E:144 | E:256 | 0.0 | 0.0 | E | -165.9 | 140.0 | NA | NA | NA | |||||||||||||
| PHE | F:144 | F:256 | 0.0 | 0.0 | E | -159.8 | 143.4 | NA | NA | NA | |||||||||||||
| 6brb | 1 | P29965 | 100.0 | 5e-103 |
X-RAY |
2018-12-05 | PHE | A:137 | A:256 | 0.0 | 0.0 | E | -160.8 | 134.4 | 0.0 | 0.0 | 0.0 |
HOH |
6.246 |
N |
O |
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| 3lkj | 1 | P29965 | 100.0 | 6e-102 |
X-RAY |
2011-02-02 | PHE | A:136 | A:256 | 0.0 | 0.0 | E | -155.5 | 135.3 | 0.0 | 0.0 | 0.0 |
HOH |
4.041 |
CE2 |
O |
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| PHE | B:136 | B:256 | 0.0 | 0.0 | E | -147.7 | 132.1 | 0.0 | 0.0 | 0.0 |
LKJ HOH |
7.631 4.197 |
CA CE2 |
C27 O |
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| PHE | C:136 | C:256 | 0.0 | 0.0 | E | -165.4 | 130.8 | 0.0 | 0.0 | 0.0 |
LKJ HOH |
7.261 4.984 |
N N |
O6 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p29965-f1 | 1 | P29965 | 100.0 | 0.0 | PHE | A:256 | A:256 | 0.0 | 0.0 | E | -141.9 | 136.3 | |