Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 135741558 | . | G | A | CCDS14659.1:NM_000074.2:c.770gGc>gAc_NP_000065.1:p.257G>D | Homo sapiens CD40 ligand (CD40LG), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1aly | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
1997-09-17 | GLY | A:142 | A:257 | 0.0 | 0.0 | E | -175.3 | -165.5 | 0.0 | 0.0 | 0.0 |
HOH |
5.306 |
H |
H1 |
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| 1i9r | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2002-03-20 | GLY | A:142 | A:257 | 0.0 | 0.0 | E | 176.7 | 168.8 | 0.0 | 0.0 | 0.0 | ||||||
| GLY | B:142 | B:257 | 0.0 | 0.0 | E | 173.8 | 169.2 | 0.0 | 0.0 | 0.0 | |||||||||||||
| GLY | C:142 | C:257 | 0.0 | 0.0 | E | 179.9 | 169.4 | 0.0 | 0.0 | 0.0 | |||||||||||||
| 6w9g | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2020-12-23 | GLY | A:142 | A:257 | 0.0 | 0.0 | E | -168.5 | 179.3 | 0.0 | 0.0 | 0.0 |
HOH |
6.281 |
N |
O |
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| GLY | B:142 | B:257 | 0.0 | 0.0 | E | -163.9 | -177.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.547 |
O |
O |
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| GLY | C:142 | C:257 | 0.0 | 0.0 | E | -162.4 | -177.5 | 0.0 | 0.0 | 0.0 |
HOH |
7.299 |
O |
O |
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| 7sgm | 1 | P29965 | 100.0 | 9e-107 |
X-RAY |
2022-02-02 | GLY | A:142 | A:257 | 0.0 | 0.0 | E | -165.4 | -179.7 | 0.0 | 0.0 | 0.0 |
HOH |
7.338 |
CA |
O |
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| GLY | B:142 | B:257 | 0.0 | 0.0 | E | -167.5 | -177.9 | 0.0 | 0.0 | 0.0 |
HOH |
7.127 |
CA |
O |
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| GLY | C:142 | C:257 | 0.0 | 0.0 | E | -166.2 | -178.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.244 |
N |
O |
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| 3qd6 | 1 | P29965 | 100.0 | 1e-106 |
X-RAY |
2011-02-02 | GLY | A:145 | A:257 | 0.0 | 0.0 | E | -170.3 | 171.5 | 0.0 | 0.0 | 0.0 | ||||||
| GLY | B:145 | B:257 | 0.0 | 0.0 | E | -170.8 | 178.2 | 0.0 | 0.0 | 0.0 | |||||||||||||
| GLY | C:145 | C:257 | 0.0 | 0.0 | E | -173.4 | -179.1 | 0.0 | 0.0 | 0.0 | |||||||||||||
| GLY | D:145 | D:257 | 0.0 | 0.0 | E | -164.7 | 173.9 | NA | NA | NA | |||||||||||||
| GLY | E:145 | E:257 | 0.0 | 0.0 | E | -176.1 | 179.8 | NA | NA | NA | |||||||||||||
| GLY | F:145 | F:257 | 0.0 | 0.0 | E | -177.2 | 175.8 | NA | NA | NA | |||||||||||||
| 6brb | 1 | P29965 | 100.0 | 5e-103 |
X-RAY |
2018-12-05 | GLY | A:138 | A:257 | 0.0 | 0.0 | E | -161.2 | -166.3 | 0.0 | 0.0 | 0.0 |
HOH |
9.407 |
N |
O |
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| 3lkj | 1 | P29965 | 100.0 | 6e-102 |
X-RAY |
2011-02-02 | GLY | A:137 | A:257 | 0.0 | 0.0 | E | -167.8 | 172.5 | 0.0 | 0.0 | 0.0 |
LKJ HOH |
9.086 6.292 |
O N |
C35 O |
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| GLY | B:137 | B:257 | 0.0 | 0.0 | E | -161.6 | -174.8 | 0.0 | 0.0 | 0.0 |
LKJ HOH |
7.618 7.561 |
N O |
C27 O |
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| GLY | C:137 | C:257 | 0.0 | 0.0 | E | -168.4 | 179.3 | 0.0 | 0.0 | 0.0 |
LKJ HOH |
6.732 4.814 |
CA C |
C43 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p29965-f1 | 1 | P29965 | 100.0 | 0.0 | GLY | A:257 | A:257 | 0.0 | 0.0 | E | -159.8 | 172.7 | |