Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47485461 . A C CCDS14282.1:NM_001145252.1:c.1240Tac>Gac_NP_001138724.1:p.414Y>D Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TYR B:160 B:414 55.0 0.239 -100.3 164.6 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
 2019-08-21 TYR D:160 V:414 52.0 0.226 -99.7 165.9 52.0 0.226 0.0
TYR F:160 Y:414 51.0 0.222 -99.1 166.0 51.0 0.222 0.0 FUC
 9.854
 O
 C6
6rv6 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TYR B:160 B:414 59.0 0.257 -102.8 156.3 59.0 0.257 0.0 NAG
 9.765
 O
 O7
6sej 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TYR B:160 B:414 60.0 0.261 -104.2 158.6 60.0 0.261 0.0 NAG
 9.583
 O
 O7
6rur 2 P27918 100.0 8e-153 X-RAY
 2019-08-21 TYR B:160 V:414 62.0 0.27 -99.9 160.2 62.0 0.27 0.0 FUC
 9.584
 O
 C6
TYR D:160 Y:414 54.0 0.235 -100.5 159.7 54.0 0.235 0.0 FUC
 9.749
 O
 C6
7b26 1 P27918 100.0 2e-149 X-RAY
 2021-12-08 TYR A:186 B:414 51.0 0.222 -93.8 150.1 48.0 0.209 0.013 C:None:0.013
6s08 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TYR A:161 A:414 51.0 0.222 -93.5 153.5 51.0 0.222 0.0 NA
HOH
 5.808
2.674
 CE2
OH
 NA
O
6s0a 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TYR A:161 A:414 56.0 0.243 -91.9 155.3 56.0 0.243 0.0
6s0b 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TYR A:161 A:414 54.0 0.235 -100.0 153.3 54.0 0.235 0.0 HOH
 3.872
 CE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 TYR A:414 A:414 49.0 0.213 -79.1 154.5