Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47485493 . C A CCDS14282.1:NM_001145252.1:c.1208cGc>cTc_NP_001138724.1:p.403R>L Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ARG B:149 B:403 59.0 0.262 E -123.0 168.7 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
 2019-08-21 ARG D:149 V:403 63.0 0.28 E -123.6 164.9 63.0 0.28 0.0 MAN
MAN
 4.526
3.695
 NH1
NH1
 C2
O6
ARG F:149 Y:403 63.0 0.28 E -122.8 164.6 63.0 0.28 0.0 MAN
MAN
 4.772
3.817
 NH1
NH1
 C2
O6
6rv6 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ARG B:149 B:403 63.0 0.28 E -122.9 167.9 63.0 0.28 0.0 MAN
MAN
 4.519
3.493
 NH1
NH2
 C2
O5
6sej 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ARG B:149 B:403 61.0 0.271 E -118.1 164.4 61.0 0.271 0.0 MAN
MAN
 4.301
3.496
 NH1
NH1
 C2
O6
6rur 2 P27918 100.0 8e-153 X-RAY
 2019-08-21 ARG B:149 V:403 63.0 0.28 E -121.0 162.5 63.0 0.28 0.0 MAN
MAN
 4.466
4.037
 NH1
NH2
 C2
O5
ARG D:149 Y:403 65.0 0.289 E -121.3 163.2 65.0 0.289 0.0 MAN
MAN
 4.677
3.927
 NH1
NH2
 C2
O5
7b26 1 P27918 100.0 2e-149 X-RAY
 2021-12-08 ARG A:175 B:403 47.0 0.209 E -134.2 157.8 47.0 0.209 0.0 MAN
MAN
 3.638
4.514
 NH1
CD
 C1
O2
6s08 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ARG A:150 A:403 61.0 0.271 E -130.4 159.3 61.0 0.271 0.0 MAN
MAN
HOH
 2.912
4.437
2.905
 NH1
CD
NH1
 O6
O2
O
6s0a 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ARG A:150 A:403 56.0 0.249 E -133.1 162.2 56.0 0.249 0.0 MAN
MAN
HOH
 2.827
5.157
4.077
 NH1
CD
CA
 O6
O2
O
6s0b 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ARG A:150 A:403 60.0 0.267 E -142.2 162.3 60.0 0.267 0.0 MAN
MAN
 3.521
4.601
 NH1
CD
 O6
O2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 ARG A:403 A:403 57.0 0.253 E -126.5 151.4