Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47485898 . A C CCDS14282.1:NM_001145252.1:c.961Tgg>Ggg_NP_001138724.1:p.321W>G Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TRP B:67 B:321 74.0 0.29 -63.3 142.9 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
 2019-08-21 TRP D:67 V:321 70.0 0.275 -63.4 148.6 70.0 0.275 0.0 MAN
MAN
 1.516
5.890
 CD1
O
 C1
O2
TRP F:67 Y:321 69.0 0.271 -62.9 149.4 69.0 0.271 0.0 MAN
MAN
 1.517
5.889
 CD1
O
 C1
O2
6rv6 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TRP B:67 B:321 81.0 0.318 -64.3 141.8 81.0 0.318 0.0 MAN
MAN
 1.521
5.772
 CD1
O
 C1
O2
6sej 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 TRP B:67 B:321 81.0 0.318 -64.4 139.8 81.0 0.318 0.0 MAN
MAN
 1.521
5.655
 CD1
O
 C1
O2
6rur 2 P27918 100.0 8e-153 X-RAY
 2019-08-21 TRP B:67 V:321 69.0 0.271 -63.1 142.4 69.0 0.271 0.0 MAN
MAN
 1.518
5.693
 CD1
O
 C1
O2
TRP D:67 Y:321 71.0 0.278 -62.9 142.2 71.0 0.278 0.0 MAN
MAN
 1.518
5.533
 CD1
O
 C1
O2
7b26 1 P27918 100.0 2e-149 X-RAY
 2021-12-08 TRP A:93 B:321 55.0 0.216 -55.1 -44.0 55.0 0.216 0.0 MAN
MAN
 6.512
1.491
 CB
CD1
 O2
C1
6s08 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TRP A:68 A:321 74.0 0.29 -49.9 133.4 74.0 0.29 0.0 MAN
MAN
HOH
 6.030
1.510
3.577
 O
CD1
NE1
 O2
C1
O
6s0a 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TRP A:68 A:321 63.0 0.247 -49.4 139.7 63.0 0.247 0.0 MAN
MAN
HOH
 6.618
1.519
3.772
 O
CD1
N
 O2
C1
O
6s0b 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 TRP A:68 A:321 70.0 0.275 -56.6 136.3 70.0 0.275 0.0 MAN
MAN
HOH
 6.205
1.512
3.959
 O
CD1
CB
 O2
C1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 TRP A:321 A:321 75.0 0.294 -56.4 131.8