Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47486217 . C A CCDS14282.1:NM_001145252.1:c.895Gat>Tat_NP_001138724.1:p.299D>Y Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ASP B:45 B:299 122.0 0.813 -131.3 135.7 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
 2019-08-21 ASP D:45 V:299 121.0 0.807 -129.1 140.8 121.0 0.807 0.0 MAN
MAN
 6.400
9.109
 O
O
 O5
C2
ASP F:45 Y:299 120.0 0.8 -129.3 140.1 120.0 0.8 0.0 MAN
MAN
 6.296
8.658
 O
O
 O5
O2
6rv6 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ASP B:45 B:299 124.0 0.827 -132.3 134.4 124.0 0.827 0.0 MAN
MAN
 6.002
8.952
 O
O
 O5
C1
6sej 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 ASP B:45 B:299 123.0 0.82 -124.7 149.0 123.0 0.82 0.0 MAN
MAN
 5.782
8.760
 O
O
 O5
C1
6rur 2 P27918 100.0 8e-153 X-RAY
 2019-08-21 ASP B:45 V:299 125.0 0.833 -127.8 138.7 125.0 0.833 0.0 MAN
MAN
 6.257
8.559
 O
O
 O5
C2
ASP D:45 Y:299 127.0 0.847 -128.0 137.1 127.0 0.847 0.0 MAN
MAN
 6.192
8.691
 O
O
 O5
C1
7b26 1 P27918 100.0 2e-149 X-RAY
 2021-12-08 ASP A:71 B:299 121.0 0.807 -88.4 127.9 121.0 0.807 0.0 MAN
BMA
 6.311
8.808
 O
O
 C1
O2
6s08 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ASP A:46 A:299 120.0 0.8 -92.0 131.0 120.0 0.8 0.0 MAN
MAN
HOH
 5.525
8.508
4.083
 O
O
CA
 O5
O2
O
6s0a 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ASP A:46 A:299 118.0 0.787 -93.5 132.4 118.0 0.787 0.0 MAN
MAN
HOH
 5.924
8.497
3.170
 O
O
CB
 O5
C1
O
6s0b 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 ASP A:46 A:299 110.0 0.733 -102.6 140.9 110.0 0.733 0.0 MAN
MAN
HOH
 5.792
8.911
2.695
 O
O
OD2
 O5
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 ASP A:299 A:299 125.0 0.833 -86.1 140.1