Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47486219 . C A CCDS14282.1:NM_001145252.1:c.893gGc>gTc_NP_001138724.1:p.298G>V Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 GLY B:44 B:298 57.0 0.76 S 139.9 -142.6 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
 2019-08-21 GLY D:44 V:298 59.0 0.787 S 133.3 -140.7 59.0 0.787 0.0 MAN
 6.129
 CA
 O5
GLY F:44 Y:298 59.0 0.787 S 133.3 -141.1 59.0 0.787 0.0 MAN
 6.084
 CA
 O5
6rv6 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 GLY B:44 B:298 59.0 0.787 S 137.8 -143.8 59.0 0.787 0.0 MAN
 4.900
 CA
 O4
6sej 2 P27918 100.0 5e-153 X-RAY
 2019-08-21 GLY B:44 B:298 61.0 0.813 S 82.2 -152.6 61.0 0.813 0.0 MAN
 4.852
 N
 O4
6rur 2 P27918 100.0 8e-153 X-RAY
 2019-08-21 GLY B:44 V:298 60.0 0.8 S 132.6 -145.0 60.0 0.8 0.0 MAN
 5.829
 CA
 O5
GLY D:44 Y:298 58.0 0.773 S 132.2 -145.4 58.0 0.773 0.0 MAN
 6.019
 CA
 O5
7b26 1 P27918 100.0 2e-149 X-RAY
 2021-12-08 GLY A:70 B:298 66.0 0.88 S 112.3 -158.8 66.0 0.88 0.0 MAN
 6.216
 N
 C2
6s08 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 GLY A:45 A:298 61.0 0.813 S 108.1 -163.5 61.0 0.813 0.0 MAN
HOH
 4.765
3.091
 N
O
 O4
O
6s0a 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 GLY A:45 A:298 60.0 0.8 S 103.3 -161.1 60.0 0.8 0.0 MAN
HOH
 5.240
5.268
 N
O
 O4
O
6s0b 1 P27918 100.0 4e-149 X-RAY
 2019-09-04 GLY A:45 A:298 62.0 0.827 S 91.5 -152.5 62.0 0.827 0.0 MAN
HOH
 5.450
6.007
 N
N
 O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 GLY A:298 A:298 56.0 0.747 S 94.7 -173.6