Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 47486223 . C A CCDS14282.1:NM_001145252.1:c.889Gct>Tct_NP_001138724.1:p.297A>S Homo sapiens complement factor properdin (CFP), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rus 2 P27918 100.0 5e-153 X-RAY
2019-08-21 ALA B:43 B:297 80.0 0.696 S 62.6 88.4 NA NA NA
6ruv 3 P27918 100.0 5e-153 X-RAY
2019-08-21 ALA D:43 V:297 83.0 0.722 S 58.6 95.5 83.0 0.722 0.0 MAN
4.139
O
C2
ALA F:43 Y:297 84.0 0.73 S 58.7 94.1 84.0 0.73 0.0 MAN
4.141
O
O4
6rv6 2 P27918 100.0 5e-153 X-RAY
2019-08-21 ALA B:43 B:297 83.0 0.722 -89.2 131.3 83.0 0.722 0.0 MAN
3.479
O
C2
6sej 2 P27918 100.0 5e-153 X-RAY
2019-08-21 ALA B:43 B:297 80.0 0.696 -92.7 178.5 80.0 0.696 0.0 MAN
4.212
O
C2
6rur 2 P27918 100.0 8e-153 X-RAY
2019-08-21 ALA B:43 V:297 81.0 0.704 S 61.9 94.4 81.0 0.704 0.0 MAN
3.819
O
O4
ALA D:43 Y:297 80.0 0.696 S 61.2 94.6 80.0 0.696 0.0 MAN
3.995
O
O4
7b26 1 P27918 100.0 2e-149 X-RAY
2021-12-08 ALA A:69 B:297 94.0 0.817 -89.0 144.5 94.0 0.817 0.0 MAN
3.977
O
C2
6s08 1 P27918 100.0 4e-149 X-RAY
2019-09-04 ALA A:44 A:297 94.0 0.817 -86.1 140.6 94.0 0.817 0.0 MAN
HOH
2.790
4.156
O
CA
O4
O
6s0a 1 P27918 100.0 4e-149 X-RAY
2019-09-04 ALA A:44 A:297 92.0 0.8 -84.3 139.7 92.0 0.8 0.0 MAN
HOH
3.232
8.709
O
C
O4
O
6s0b 1 P27918 100.0 4e-149 X-RAY
2019-09-04 ALA A:44 A:297 90.0 0.783 S -75.2 138.9 90.0 0.783 0.0 MAN
HOH
3.664
3.023
O
N
O5
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p27918-f1 1 P27918 100.0 0.0 ALA A:297 A:297 90.0 0.783 S -79.3 137.9