Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253355 . C A CCDS14383.1:NM_007268.2:c.373Gtc>Ttc_NP_009199.1:p.125V>F Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL B:113 A:106 45.0 0.29 E -128.3 140.0 45.0 0.29 0.0 HOH
 2.861
 HG11
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL A:113 A:106 18.0 0.116 E -131.9 150.7 18.0 0.116 0.0 HOH
 2.925
 HA
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL A:107 A:106 32.0 0.206 E -128.0 146.2 32.0 0.206 0.0 HOH
 3.623
 CA
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL D:107 S:106 35.0 0.226 E -133.2 147.1 29.0 0.187 0.039 A:P01024:0.039
VAL H:107 T:106 38.0 0.245 E -132.3 144.9 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL C:107 S:106 40.0 0.258 E -146.0 151.7 24.0 0.155 0.103 A:P01024:0.103

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 VAL A:125 A:125 25.0 0.161 E -115.4 121.7