Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253370 . G A CCDS14383.1:NM_007268.2:c.358Cct>Tct_NP_009199.1:p.120P>S Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 PRO B:108 A:101 133.0 0.917 T -60.5 -32.6 133.0 0.917 0.0 HOH
 2.441
 HD3
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 PRO A:108 A:101 79.0 0.545 T -51.9 -24.5 79.0 0.545 0.0 HOH
 4.160
 HA
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 PRO A:102 A:101 82.0 0.566 T -54.6 -31.1 82.0 0.566 0.0 HOH
 2.567
 O
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 PRO D:102 S:101 116.0 0.8 T -42.6 -28.8 116.0 0.8 0.0
PRO H:102 T:101 116.0 0.8 T -42.5 -30.8 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 PRO C:102 S:101 95.0 0.655 S -61.4 -45.5 95.0 0.655 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 PRO A:120 A:120 85.0 0.586 T -55.3 -32.5