Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253379 . A C CCDS14383.1:NM_007268.2:c.349Tgg>Ggg_NP_009199.1:p.117W>G Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 TRP B:105 A:98 20.0 0.078 E -121.2 147.1 20.0 0.078 0.0 HOH
 2.698
 HD1
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 TRP A:105 A:98 1.0 0.004 E -116.7 150.9 1.0 0.004 0.0 HOH
 3.536
 HE1
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 TRP A:99 A:98 3.0 0.012 E -123.9 146.9 3.0 0.012 0.0 HOH
 3.441
 NE1
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 TRP D:99 S:98 1.0 0.004 E -107.7 152.5 1.0 0.004 0.0
TRP H:99 T:98 1.0 0.004 E -104.2 154.5 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 TRP C:99 S:98 1.0 0.004 E -116.7 148.7 1.0 0.004 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 TRP A:117 A:117 3.0 0.012 E -114.5 144.0