Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253400 . G A CCDS14383.1:NM_007268.2:c.328Cac>Tac_NP_009199.1:p.110H>Y Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 HIS B:98 A:91 65.0 0.333 E -100.0 130.8 37.0 0.19 0.143 A:None:0.144
 HOH
 1.812
 HE2
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 HIS A:98 A:91 64.0 0.328 E -98.3 137.2 22.0 0.113 0.215 B:None:0.215
 HOH
 2.506
 H
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 HIS A:92 A:91 94.0 0.482 E -92.6 126.9 94.0 0.482 0.0 HOH
 2.668
 NE2
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 HIS D:92 S:91 86.0 0.441 E -84.9 125.3 70.0 0.359 0.082 A:P01024:0.082
HIS H:92 T:91 84.0 0.431 E -87.2 127.9 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 HIS C:92 S:91 89.0 0.456 E -96.9 117.3 64.0 0.328 0.128 A:P01024:0.128

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 HIS A:110 A:110 92.0 0.472 E -86.2 126.0