Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253406 . G A CCDS14383.1:NM_007268.2:c.322Cgg>Tgg_NP_009199.1:p.108R>W Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 ARG B:96 A:89 137.0 0.609 -60.7 120.9 137.0 0.609 0.0 HOH
 1.755
 HH21
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 ARG A:96 A:89 136.0 0.604 -62.9 119.1 136.0 0.604 0.0 HOH
 1.655
 HH11
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG A:90 A:89 116.0 0.516 -62.8 119.8 116.0 0.516 0.0 HOH
 2.730
 CG
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG D:90 S:89 126.0 0.56 -49.9 117.2 87.0 0.387 0.173 A:P01024:0.173
ARG H:90 T:89 125.0 0.556 -50.4 115.3 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG C:90 S:89 111.0 0.493 -64.2 122.3 54.0 0.24 0.253 A:P01024:0.253

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 ARG A:108 A:108 125.0 0.556 -59.0 114.0