Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253474 . C A CCDS14383.1:NM_007268.2:c.254cGc>cTc_NP_009199.1:p.85R>L Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 ARG B:73 A:66 21.0 0.093 T -128.5 2.9 21.0 0.093 0.0 HOH
 2.772
 HG3
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 ARG A:73 A:66 37.0 0.164 T -116.4 -20.6 37.0 0.164 0.0 HOH
 2.829
 O
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG A:67 A:66 36.0 0.16 T -126.4 -9.0 36.0 0.16 0.0 HOH
 3.199
 O
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG D:67 S:66 24.0 0.107 T -94.4 1.7 24.0 0.107 0.0
ARG H:67 T:66 24.0 0.107 T -91.8 -3.4 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 ARG C:67 S:66 29.0 0.129 S -101.7 -18.4 28.0 0.124 0.005 A:P01024:0.004

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 ARG A:85 A:85 38.0 0.169 T -113.3 -18.3