Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253555 . A C CCDS14383.1:NM_007268.2:c.173gTa>gGa_NP_009199.1:p.58V>G Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL B:46 A:39 3.0 0.019 E -129.7 143.7 3.0 0.019 0.0 HOH
 3.040
 HG21
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL A:46 A:39 1.0 0.006 E -125.1 147.3 1.0 0.006 0.0 HOH
 2.966
 HG11
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL A:40 A:39 4.0 0.026 E -131.5 150.2 4.0 0.026 0.0 HOH
 3.000
 O
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL D:40 S:39 9.0 0.058 E -121.9 136.4 9.0 0.058 0.0
VAL H:40 T:39 8.0 0.052 E -119.5 132.8 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL C:40 S:39 0.0 0.0 E -76.5 143.2 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 VAL A:58 A:58 3.0 0.019 E -122.8 136.5