Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 65253574 . C A CCDS14383.1:NM_007268.2:c.154Gtc>Ttc_NP_009199.1:p.52V>F Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5imk 2 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL B:40 A:33 50.0 0.323 E -110.8 -17.8 50.0 0.323 0.0 HOH
 2.740
 O
 O
5iml 1 Q9Y279 99.53 1e-158 X-RAY
 2017-01-11 VAL A:40 A:33 48.0 0.31 E -109.7 -21.9 48.0 0.31 0.0 HOH
 2.840
 O
 O
2icc 1 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL A:34 A:33 54.0 0.348 E -118.1 -17.1 54.0 0.348 0.0 HOH
 2.712
 O
 O
2ice 4 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL D:34 S:33 42.0 0.271 E -119.7 -12.8 42.0 0.271 0.0
VAL H:34 T:33 46.0 0.297 E -120.6 -11.0 NA NA NA
2icf 3 Q9Y279 100.0 2e-83 X-RAY
 2006-11-07 VAL C:34 S:33 63.0 0.406 E -131.3 -10.5 55.0 0.355 0.051 B:P01024:0.052

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9y279-f1 1 Q9Y279 100.0 0.0 VAL A:52 A:52 49.0 0.316 E -113.8 -25.4