Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 133607479 . G A CCDS14641.1:NM_000194.2:c.118Gga>Aga_NP_000185.1:p.40G>R Homo sapiens hypoxanthine phosphoribosyltransferase 1 (HPRT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1bzy 1 P00492 100.0 3e-161 X-RAY
 1999-06-22 GLY A:39 A:39 38.0 0.507 H -57.6 -35.4 4.0 0.053 0.454 C:P00492:0.453
 HOH
 3.394
 CA
 O
GLY B:39 B:39 40.0 0.533 H -58.0 -37.9 5.0 0.067 0.466 D:P00492:0.467
 HOH
 3.342
 N
 O
GLY C:39 C:39 38.0 0.507 H -62.7 -33.6 4.0 0.053 0.454 A:P00492:0.453
 HOH
 3.389
 N
 O
GLY D:39 D:39 39.0 0.52 H -56.5 -37.6 4.0 0.053 0.467 B:P00492:0.467
 HOH
 3.474
 CA
 O
1hmp 1 P00492 100.0 3e-161 X-RAY
 1995-06-03 GLY A:39 A:39 36.0 0.48 H -54.1 -38.9 3.0 0.04 0.44 B:P00492:0.44
 HOH
 7.278
 O
 O
GLY B:39 B:39 38.0 0.507 H -69.1 -32.7 1.0 0.013 0.494 A:P00492:0.493
 HOH
 7.441
 O
 O
1z7g 1 P00492 100.0 3e-161 X-RAY
 2005-08-02 GLY A:39 A:39 39.0 0.52 H -60.6 -38.7 4.0 0.053 0.467 B:P00492:0.467
 HOH
 3.501
 N
 O
GLY B:39 B:39 38.0 0.507 H -59.8 -33.8 5.0 0.067 0.44 A:P00492:0.44
 HOH
 3.474
 N
 O
GLY C:39 C:39 39.0 0.52 H -60.2 -37.4 NA NA NA
GLY D:39 D:39 38.0 0.507 H -61.8 -31.3 NA NA NA
3gep 1 P00492 100.0 3e-161 X-RAY
 2009-08-18 GLY A:39 A:39 38.0 0.507 H -65.3 -38.0 4.0 0.053 0.454 B:P00492:0.453
 HOH
 5.964
 O
 O
GLY B:39 B:39 38.0 0.507 H -60.8 -30.4 6.0 0.08 0.427 A:P00492:0.427
 HOH
 5.620
 N
 O
3ggc 1 P00492 100.0 3e-161 X-RAY
 2009-08-18 GLY A:39 A:39 39.0 0.52 H -64.8 -28.2 5.0 0.067 0.453 B:P00492:0.453
 HOH
 4.024
 O
 O
GLY B:39 B:39 39.0 0.52 H -57.7 -21.8 6.0 0.08 0.44 A:P00492:0.44
 HOH
 3.141
 CA
 O
3ggj 1 P00492 100.0 3e-161 X-RAY
 2009-08-18 GLY A:39 A:39 40.0 0.533 H -60.1 -30.8 5.0 0.067 0.466 B:P00492:0.467
 HOH
 4.439
 O
 O
GLY B:39 B:39 42.0 0.56 H -50.1 -36.5 6.0 0.08 0.48 A:P00492:0.48
 HOH
 3.526
 CA
 O
4rab 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 36.0 0.48 H -68.7 -30.9 4.0 0.053 0.427 B:P00492:0.427
 HOH
 6.769
 O
 O
GLY B:39 B:39 38.0 0.507 H -61.7 -36.6 5.0 0.067 0.44 A:P00492:0.44
 HOH
 6.184
 N
 O
GLY C:39 C:39 37.0 0.493 H -65.1 -34.2 4.0 0.053 0.44 D:P00492:0.44
 HOH
 4.291
 O
 O
GLY D:39 D:39 38.0 0.507 H -61.5 -36.3 3.0 0.04 0.467 C:P00492:0.467
 HOH
 3.270
 N
 O
4rac 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 37.0 0.493 H -63.5 -33.6 3.0 0.04 0.453 B:P00492:0.453
 HOH
 3.778
 N
 O
GLY B:39 B:39 35.0 0.467 H -62.9 -37.1 4.0 0.053 0.414 A:P00492:0.413
 HOH
 3.631
 N
 O
GLY C:39 C:39 38.0 0.507 H -62.7 -36.9 4.0 0.053 0.454 D:P00492:0.453
 HOH
 4.478
 O
 O
GLY D:39 D:39 39.0 0.52 H -58.9 -41.1 3.0 0.04 0.48 C:P00492:0.48
 HOH
 3.541
 N
 O
4rad 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 37.0 0.493 H -60.4 -35.7 3.0 0.04 0.453 B:P00492:0.453
 HOH
 3.444
 HA2
 O
GLY B:39 B:39 38.0 0.507 H -63.0 -35.3 4.0 0.053 0.454 A:P00492:0.453
 HOH
 3.205
 HA2
 O
GLY C:39 C:39 37.0 0.493 H -62.9 -38.0 3.0 0.04 0.453 D:P00492:0.453
 HOH
 3.057
 HA2
 O
GLY D:39 D:39 37.0 0.493 H -59.5 -38.1 4.0 0.053 0.44 C:P00492:0.44
 HOH
 3.223
 HA2
 O
GLY E:39 E:39 36.0 0.48 H -66.2 -34.3 NA NA NA
GLY F:39 F:39 37.0 0.493 H -62.0 -34.6 NA NA NA
GLY G:39 G:39 37.0 0.493 H -63.2 -34.2 NA NA NA
GLY H:39 H:39 38.0 0.507 H -61.3 -35.3 NA NA NA
4ran 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 40.0 0.533 H -64.5 -34.9 4.0 0.053 0.48 B:P00492:0.48
 HOH
 3.797
 CA
 O
GLY B:39 B:39 37.0 0.493 H -66.8 -31.8 4.0 0.053 0.44 A:P00492:0.44
 HOH
 4.429
 O
 O
GLY C:39 C:39 38.0 0.507 H -67.5 -33.7 4.0 0.053 0.454 D:P00492:0.453
 HOH
 3.882
 CA
 O
GLY D:39 D:39 36.0 0.48 H -62.3 -37.5 4.0 0.053 0.427 C:P00492:0.427
 HOH
 4.507
 O
 O
4rao 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 36.0 0.48 H -65.4 -34.3 3.0 0.04 0.44 B:P00492:0.44
 HOH
 3.628
 N
 O
GLY B:39 B:39 38.0 0.507 H -61.4 -33.3 4.0 0.053 0.454 A:P00492:0.453
 HOH
 3.531
 N
 O
GLY C:39 C:39 38.0 0.507 H -64.3 -33.4 4.0 0.053 0.454 D:P00492:0.453
 HOH
 3.409
 CA
 O
GLY D:39 D:39 38.0 0.507 H -61.3 -35.4 3.0 0.04 0.467 C:P00492:0.467
 HOH
 3.672
 N
 O
4raq 1 P00492 100.0 3e-161 X-RAY
 2015-01-07 GLY A:39 A:39 37.0 0.493 H -61.9 -27.9 4.0 0.053 0.44 B:P00492:0.44
 HOH
 5.904
 N
 O
GLY B:39 B:39 36.0 0.48 H -54.5 -45.9 3.0 0.04 0.44 A:P00492:0.44
 HOH
 6.375
 O
 O
GLY C:39 C:39 36.0 0.48 H -71.9 -35.7 4.0 0.053 0.427 D:P00492:0.427
 HOH
 3.492
 N
 O
GLY D:39 D:39 35.0 0.467 H -71.2 -36.4 4.0 0.053 0.414 C:P00492:0.413
 HOH
 4.673
 O
 O
4ijq 1 P00492 100.0 4e-161 X-RAY
 2013-03-27 GLY A:45 A:39 39.0 0.52 H -61.8 -33.2 4.0 0.053 0.467 B:P00492:0.467
 HOH
 3.875
 CA
 O
GLY B:45 B:39 39.0 0.52 H -63.5 -33.5 6.0 0.08 0.44 A:P00492:0.44
 HOH
 3.406
 N
 O
GLY C:45 C:39 39.0 0.52 H -51.8 -42.3 4.0 0.053 0.467 D:P00492:0.467
 HOH
 3.617
 N
 O
GLY D:45 D:39 38.0 0.507 H -60.6 -41.1 3.0 0.04 0.467 C:P00492:0.467
 HOH
 3.483
 CA
 O
4kn6 1 P00492 100.0 1e-160 X-RAY
 2013-08-14 GLY A:38 A:39 39.0 0.52 H -63.5 -25.0 39.0 0.52 0.0 HOH
 5.505
 O
 O
6bnj 1 P00492 99.08 6e-160 X-RAY
 2017-12-06 GLY A:40 A:39 38.0 0.507 H -63.0 -35.0 3.0 0.04 0.467 B:P00492:0.467
 HOH
 3.444
 N
 O
GLY B:40 B:39 38.0 0.507 H -69.2 -32.7 5.0 0.067 0.44 A:P00492:0.44
 HOH
 3.344
 N
 O
GLY C:40 C:39 38.0 0.507 H -63.8 -31.2 4.0 0.053 0.454 D:P00492:0.453
 HOH
 3.485
 N
 O
GLY D:40 D:39 38.0 0.507 H -65.5 -39.2 4.0 0.053 0.454 C:P00492:0.453
 HOH
 3.584
 N
 O
5hia 1 P00492 99.08 8e-160 X-RAY
 2017-01-18 GLY A:46 A:39 38.0 0.507 H -64.3 -34.3 4.0 0.053 0.454 B:P00492:0.453
 HOH
 3.317
 N
 O
GLY B:46 B:39 39.0 0.52 H -65.6 -34.1 4.0 0.053 0.467 A:P00492:0.467
 HOH
 3.281
 N
 O
GLY C:46 C:39 37.0 0.493 H -59.7 -38.0 4.0 0.053 0.44 D:P00492:0.44
 HOH
 4.160
 O
 O
GLY D:46 D:39 40.0 0.533 H -61.2 -36.8 5.0 0.067 0.466 C:P00492:0.467
 HOH
 3.275
 N
 O
5brn 1 P00492 98.62 3e-159 X-RAY
 2015-10-14 GLY A:40 A:39 39.0 0.52 H -68.1 -35.9 5.0 0.067 0.453 C:P00492:0.453
 HOH
 5.806
 O
 O
GLY B:40 B:39 41.0 0.547 H -67.8 -32.7 6.0 0.08 0.467 D:P00492:0.467
 HOH
 4.408
 O
 O
GLY C:40 C:39 39.0 0.52 H -66.3 -32.4 4.0 0.053 0.467 A:P00492:0.467
 HOH
 5.749
 N
 O
GLY D:40 D:39 41.0 0.547 H -65.2 -30.6 4.0 0.053 0.494 B:P00492:0.493
 HOH
 3.410
 N
 O
5bsk 1 P00492 98.62 3e-159 X-RAY
 2015-09-23 GLY A:40 A:39 38.0 0.507 H -63.9 -35.6 6.0 0.08 0.427 D:P00492:0.427
 HOH
 3.944
 N
 O
GLY B:40 B:39 39.0 0.52 H -64.7 -38.8 5.0 0.067 0.453 C:P00492:0.453
 HOH
 4.411
 O
 O
GLY C:40 C:39 38.0 0.507 H -64.3 -35.7 5.0 0.067 0.44 B:P00492:0.44
 HOH
 3.618
 CA
 O
GLY D:40 D:39 39.0 0.52 H -66.9 -36.4 6.0 0.08 0.44 A:P00492:0.44
 HOH
 4.649
 O
 O
5w8v 1 P00492 100.0 7e-159 X-RAY
 2017-08-30 GLY A:37 A:39 39.0 0.52 H -66.9 -32.6 5.0 0.067 0.453 B:P00492:0.453
 HOH
 3.504
 N
 O
GLY B:37 B:39 40.0 0.533 H -63.3 -34.6 4.0 0.053 0.48 A:P00492:0.48
 HOH
 3.446
 N
 O
GLY C:37 C:39 39.0 0.52 H -63.0 -33.3 4.0 0.053 0.467 D:P00492:0.467
 HOH
 3.529
 N
 O
GLY D:37 D:39 39.0 0.52 H -63.3 -36.1 5.0 0.067 0.453 C:P00492:0.453
 HOH
 3.664
 N
 O
1d6n 1 P00492 99.07 6e-157 X-RAY
 1999-12-30 GLY A:36 A:39 37.0 0.493 H -45.3 -65.7 37.0 0.493 0.0 HOH
 9.107
 O
 O
GLY B:36 B:39 38.0 0.507 H -69.0 -16.6 38.0 0.507 0.0 HOH
 8.223
 N
 O
2vfa 1 P20035,P00492 80.48 3e-122 X-RAY
 2008-06-17 GLY A:48 A:48 39.0 0.52 H -61.9 -38.9 5.0 0.067 0.453 B:P20035+P00492:0.453
 HOH
 3.630
 N
 O
GLY B:48 B:48 43.0 0.573 H -64.0 -34.7 6.0 0.08 0.493 A:P20035+P00492:0.493
 HOH
 3.846
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00492-f1 1 P00492 100.0 2e-162 GLY A:40 A:40 40.0 0.533 H -59.3 -41.1