Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 133627565 | . | C | A | CCDS14641.1:NM_000194.2:c.430Cag>Aag_NP_000185.1:p.144Q>K | Homo sapiens hypoxanthine phosphoribosyltransferase 1 (HPRT1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1bzy | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
1999-06-22 | GLN | A:143 | A:143 | 100.0 | 0.556 | H | -64.6 | -47.3 | 100.0 | 0.556 | 0.0 |
IMU HOH |
6.633 4.618 |
N OE1 |
O2P O |
||
GLN | B:143 | B:143 | 92.0 | 0.511 | H | -59.9 | -43.4 | 92.0 | 0.511 | 0.0 |
IMU HOH |
6.491 2.524 |
N O |
O2P O |
|||||||||
GLN | C:143 | C:143 | 95.0 | 0.528 | H | -56.9 | -51.7 | 95.0 | 0.528 | 0.0 |
IMU HOH |
6.609 4.965 |
N N |
O2P O |
|||||||||
GLN | D:143 | D:143 | 96.0 | 0.533 | H | -64.9 | -42.0 | 96.0 | 0.533 | 0.0 |
IMU HOH |
6.853 2.703 |
N O |
O3P O |
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1hmp | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
1995-06-03 | GLN | A:143 | A:143 | 96.0 | 0.533 | H | -59.6 | -38.0 | 96.0 | 0.533 | 0.0 |
5GP HOH |
6.789 4.878 |
N N |
O3P O |
||
GLN | B:143 | B:143 | 90.0 | 0.5 | H | -61.5 | -40.5 | 90.0 | 0.5 | 0.0 |
5GP HOH |
7.192 7.311 |
N NE2 |
O1P O |
|||||||||
1z7g | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2005-08-02 | GLN | A:143 | A:143 | 111.0 | 0.617 | H | -60.3 | -36.8 | 111.0 | 0.617 | 0.0 |
HOH |
3.102 |
OE1 |
O |
||
GLN | B:143 | B:143 | 142.0 | 0.789 | H | -63.9 | -44.6 | 142.0 | 0.789 | 0.0 |
HOH |
2.875 |
CG |
O |
|||||||||
GLN | C:143 | C:143 | 85.0 | 0.472 | H | -59.4 | -39.9 | NA | NA | NA | |||||||||||||
GLN | D:143 | D:143 | 141.0 | 0.783 | H | -60.5 | -39.6 | NA | NA | NA | |||||||||||||
3gep | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | GLN | A:143 | A:143 | 84.0 | 0.467 | H | -63.0 | -35.4 | 84.0 | 0.467 | 0.0 |
24H HOH |
7.038 2.500 |
N O |
OAC O |
||
GLN | B:143 | B:143 | 110.0 | 0.611 | H | -61.1 | -38.1 | 110.0 | 0.611 | 0.0 |
24H HOH |
6.985 5.113 |
N N |
OAF O |
|||||||||
3ggc | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | GLN | A:143 | A:143 | 87.0 | 0.483 | H | -60.0 | -29.3 | 87.0 | 0.483 | 0.0 |
H26 HOH |
6.982 4.864 |
N N |
OAE O |
||
GLN | B:143 | B:143 | 105.0 | 0.583 | H | -56.9 | -44.1 | 105.0 | 0.583 | 0.0 |
H26 HOH |
7.018 4.478 |
N N |
OAC O |
|||||||||
3ggj | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | GLN | A:143 | A:143 | 86.0 | 0.478 | H | -62.3 | -31.8 | 86.0 | 0.478 | 0.0 |
25H HOH |
6.876 4.806 |
N N |
OAE O |
||
GLN | B:143 | B:143 | 107.0 | 0.594 | H | -64.7 | -36.5 | 107.0 | 0.594 | 0.0 |
25H HOH |
6.991 5.002 |
N N |
OAE O |
|||||||||
4rab | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 91.0 | 0.506 | H | -60.5 | -39.8 | 91.0 | 0.506 | 0.0 |
3L3 MG HOH |
6.799 9.987 5.066 |
N N N |
OAF MG O |
||
GLN | B:143 | B:143 | 79.0 | 0.439 | H | -59.2 | -39.2 | 79.0 | 0.439 | 0.0 |
3L3 HOH |
6.787 5.104 |
N N |
OAF O |
|||||||||
GLN | C:143 | C:143 | 95.0 | 0.528 | H | -52.1 | -49.3 | 95.0 | 0.528 | 0.0 |
3L3 HOH |
6.757 5.288 |
N N |
OAE O |
|||||||||
GLN | D:143 | D:143 | 89.0 | 0.494 | H | -56.7 | -45.4 | 89.0 | 0.494 | 0.0 |
3L3 HOH |
6.858 3.098 |
N CG |
OAE O |
|||||||||
4rac | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 67.0 | 0.372 | H | -58.7 | -44.4 | 67.0 | 0.372 | 0.0 |
3L4 HOH |
6.897 5.106 |
N N |
OAE O |
||
GLN | B:143 | B:143 | 82.0 | 0.456 | H | -69.1 | -44.6 | 82.0 | 0.456 | 0.0 |
3L4 HOH |
6.858 2.920 |
N O |
OAE O |
|||||||||
GLN | C:143 | C:143 | 82.0 | 0.456 | H | -71.5 | -40.6 | 82.0 | 0.456 | 0.0 |
3L4 HOH |
6.566 5.115 |
N N |
OAC O |
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GLN | D:143 | D:143 | 87.0 | 0.483 | H | -57.5 | -39.9 | 87.0 | 0.483 | 0.0 |
3L4 HOH |
7.407 9.763 |
N CG |
OAF O |
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4rad | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 138.0 | 0.767 | H | -61.1 | -46.0 | 138.0 | 0.767 | 0.0 |
3L5 MG HOH |
6.039 7.472 4.456 |
H H H |
OAG MG O |
||
GLN | B:143 | B:143 | 58.0 | 0.322 | H | -69.1 | -43.3 | 58.0 | 0.322 | 0.0 |
3L5 MG HOH |
5.971 7.250 3.310 |
H H HE22 |
OAG MG O |
|||||||||
GLN | C:143 | C:143 | 89.0 | 0.494 | H | -66.4 | -41.8 | 89.0 | 0.494 | 0.0 |
3L5 HOH |
6.022 2.361 |
H OE1 |
OAG O |
|||||||||
GLN | D:143 | D:143 | 87.0 | 0.483 | H | -65.0 | -36.0 | 87.0 | 0.483 | 0.0 |
3L5 HOH |
6.326 4.321 |
H H |
OAH O |
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GLN | E:143 | E:143 | 73.0 | 0.406 | H | -66.2 | -36.1 | NA | NA | NA | |||||||||||||
GLN | F:143 | F:143 | 96.0 | 0.533 | H | -63.4 | -42.0 | NA | NA | NA | |||||||||||||
GLN | G:143 | G:143 | 80.0 | 0.444 | H | -68.7 | -46.6 | NA | NA | NA | |||||||||||||
GLN | H:143 | H:143 | 97.0 | 0.539 | H | -62.6 | -42.5 | NA | NA | NA | |||||||||||||
4ran | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 85.0 | 0.472 | H | -57.8 | -46.8 | 85.0 | 0.472 | 0.0 |
3L6 HOH |
6.902 5.258 |
N N |
OAF O |
||
GLN | B:143 | B:143 | 87.0 | 0.483 | H | -62.7 | -45.6 | 87.0 | 0.483 | 0.0 |
3L6 HOH |
6.977 8.124 |
N N |
OAD O |
|||||||||
GLN | C:143 | C:143 | 77.0 | 0.428 | H | -60.6 | -38.7 | 77.0 | 0.428 | 0.0 |
3L6 HOH |
6.528 6.804 |
N O |
OAD O |
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GLN | D:143 | D:143 | 100.0 | 0.556 | H | -59.8 | -51.0 | 100.0 | 0.556 | 0.0 |
3L6 |
6.889 |
N |
OAD |
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4rao | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 88.0 | 0.489 | H | -59.1 | -38.6 | 88.0 | 0.489 | 0.0 |
3L7 HOH |
6.700 2.426 |
N O |
OAG O |
||
GLN | B:143 | B:143 | 113.0 | 0.628 | H | -56.4 | -40.4 | 113.0 | 0.628 | 0.0 |
3L7 HOH |
6.816 5.167 |
N N |
OAG O |
|||||||||
GLN | C:143 | C:143 | 98.0 | 0.544 | H | -49.9 | -48.9 | 98.0 | 0.544 | 0.0 |
3L7 HOH |
6.829 2.359 |
N O |
OAG O |
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GLN | D:143 | D:143 | 91.0 | 0.506 | H | -60.3 | -37.7 | 91.0 | 0.506 | 0.0 |
3L7 HOH |
6.884 2.574 |
N O |
OAF O |
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4raq | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | GLN | A:143 | A:143 | 83.0 | 0.461 | H | -67.1 | -27.9 | 83.0 | 0.461 | 0.0 |
3L8 HOH |
6.854 7.591 |
N CG |
OAD O |
||
GLN | B:143 | B:143 | 79.0 | 0.439 | H | -64.3 | -43.3 | 79.0 | 0.439 | 0.0 |
3L8 HOH |
6.773 2.511 |
N O |
OAD O |
|||||||||
GLN | C:143 | C:143 | 98.0 | 0.544 | H | -50.9 | -45.4 | 98.0 | 0.544 | 0.0 |
3L8 MG HOH |
7.071 9.586 2.854 |
N N NE2 |
OAD MG O |
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GLN | D:143 | D:143 | 95.0 | 0.528 | H | -56.9 | -46.2 | 95.0 | 0.528 | 0.0 |
3L8 HOH |
7.084 5.018 |
N N |
OAE O |
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4ijq | 1 | P00492 | 100.0 | 4e-161 |
X-RAY |
2013-03-27 | GLN | A:149 | A:143 | 89.0 | 0.494 | H | -58.9 | -42.2 | 89.0 | 0.494 | 0.0 |
SV2 HOH |
6.876 2.784 |
N OE1 |
OAH O |
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GLN | B:149 | B:143 | 86.0 | 0.478 | H | -56.6 | -47.6 | 86.0 | 0.478 | 0.0 |
SV2 HOH |
6.685 2.700 |
N O |
OAH O |
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GLN | C:149 | C:143 | 90.0 | 0.5 | H | -56.4 | -36.6 | 90.0 | 0.5 | 0.0 |
SV2 HOH |
6.778 2.782 |
N O |
OAH O |
|||||||||
GLN | D:149 | D:143 | 79.0 | 0.439 | H | -53.4 | -46.5 | 79.0 | 0.439 | 0.0 |
SV2 HOH |
6.809 2.600 |
N OE1 |
OAD O |
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4kn6 | 1 | P00492 | 100.0 | 1e-160 |
X-RAY |
2013-08-14 | GLN | A:142 | A:143 | 94.0 | 0.522 | H | -55.2 | -47.5 | 94.0 | 0.522 | 0.0 |
1RP HOH |
6.143 7.170 |
H H |
OAG O |
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6bnj | 1 | P00492 | 99.08 | 6e-160 |
X-RAY |
2017-12-06 | GLN | A:144 | A:143 | 81.0 | 0.45 | H | -62.5 | -39.3 | 81.0 | 0.45 | 0.0 |
WPG HOH |
6.529 2.675 |
N NE2 |
OAI O |
||
GLN | B:144 | B:143 | 89.0 | 0.494 | H | -56.7 | -42.1 | 89.0 | 0.494 | 0.0 |
WPG HOH |
6.646 2.594 |
N NE2 |
OAI O |
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GLN | C:144 | C:143 | 71.0 | 0.394 | H | -56.9 | -41.8 | 71.0 | 0.394 | 0.0 |
WPG HOH |
6.760 3.565 |
N O |
OAI O |
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GLN | D:144 | D:143 | 82.0 | 0.456 | H | -64.1 | -42.0 | 82.0 | 0.456 | 0.0 |
WPG HOH |
6.711 2.355 |
N O |
OAE O |
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5hia | 1 | P00492 | 99.08 | 8e-160 |
X-RAY |
2017-01-18 | GLN | A:150 | A:143 | 93.0 | 0.517 | H | -62.4 | -37.1 | 93.0 | 0.517 | 0.0 |
YPG HOH |
6.663 5.047 |
N N |
OAI O |
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GLN | B:150 | B:143 | 91.0 | 0.506 | H | -59.3 | -38.9 | 91.0 | 0.506 | 0.0 |
YPG HOH |
6.748 2.675 |
N NE2 |
OAI O |
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GLN | C:150 | C:143 | 79.0 | 0.439 | H | -57.9 | -44.5 | 79.0 | 0.439 | 0.0 |
YPG HOH |
6.685 4.015 |
N O |
OAI O |
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GLN | D:150 | D:143 | 89.0 | 0.494 | H | -56.7 | -42.9 | 89.0 | 0.494 | 0.0 |
YPG HOH |
6.702 2.853 |
N O |
OAI O |
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5brn | 1 | P00492 | 98.62 | 3e-159 |
X-RAY |
2015-10-14 | GLN | A:144 | A:143 | 91.0 | 0.506 | H | -68.4 | -27.3 | 91.0 | 0.506 | 0.0 |
4X2 HOH |
7.247 5.262 |
N N |
O01 O |
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GLN | B:144 | B:143 | 54.0 | NA | H | -61.8 | -45.0 | 54.0 | NA | NA |
4X2 HOH |
6.918 6.437 |
N N |
O04 O |
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GLN | C:144 | C:143 | 89.0 | 0.494 | H | -59.5 | -40.9 | 89.0 | 0.494 | 0.0 |
4X2 HOH |
7.214 5.109 |
N N |
O04 O |
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GLN | D:144 | D:143 | 80.0 | 0.444 | H | -61.9 | -47.0 | 80.0 | 0.444 | 0.0 |
4X2 HOH |
6.896 5.073 |
N N |
O04 O |
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5bsk | 1 | P00492 | 98.62 | 3e-159 |
X-RAY |
2015-09-23 | GLN | A:144 | A:143 | 108.0 | 0.6 | H | -69.3 | -40.9 | 108.0 | 0.6 | 0.0 |
4X7 HOH |
6.911 6.805 |
N N |
OAC O |
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GLN | B:144 | B:143 | 84.0 | 0.467 | H | -59.9 | -41.2 | 84.0 | 0.467 | 0.0 |
4X7 HOH |
6.940 5.084 |
N N |
OAC O |
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GLN | C:144 | C:143 | 94.0 | 0.522 | H | -59.9 | -34.9 | 94.0 | 0.522 | 0.0 |
4X7 HOH |
7.210 7.040 |
N O |
OAF O |
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GLN | D:144 | D:143 | 89.0 | 0.494 | H | -60.4 | -43.2 | 89.0 | 0.494 | 0.0 |
4X7 HOH |
7.553 5.425 |
N N |
OAC O |
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5w8v | 1 | P00492 | 100.0 | 7e-159 |
X-RAY |
2017-08-30 | GLN | A:141 | A:143 | 87.0 | 0.483 | H | -57.0 | -40.7 | 87.0 | 0.483 | 0.0 |
9YP HOH |
7.006 2.791 |
N OE1 |
OAH O |
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GLN | B:141 | B:143 | 84.0 | 0.467 | H | -59.5 | -42.5 | 84.0 | 0.467 | 0.0 |
9YP HOH |
6.842 2.620 |
N OE1 |
OAG O |
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GLN | C:141 | C:143 | 86.0 | 0.478 | H | -56.9 | -42.2 | 86.0 | 0.478 | 0.0 |
9YP HOH |
6.804 2.282 |
N OE1 |
OAG O |
|||||||||
GLN | D:141 | D:143 | 77.0 | 0.428 | H | -56.4 | -47.2 | 77.0 | 0.428 | 0.0 |
9YP HOH |
6.769 2.505 |
N OE1 |
OAH O |
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1d6n | 1 | P00492 | 99.07 | 6e-157 |
X-RAY |
1999-12-30 | GLN | A:140 | A:143 | 106.0 | 0.589 | H | -50.0 | -65.4 | 106.0 | 0.589 | 0.0 |
PRP HOH |
6.252 3.210 |
N NE2 |
O3P O |
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GLN | B:140 | B:143 | 65.0 | 0.361 | H | -44.9 | -53.1 | 65.0 | 0.361 | 0.0 |
MG PRP HOH |
9.465 5.494 3.830 |
N N NE2 |
MG O2P O |
|||||||||
2vfa | 1 | P20035,P00492 | 80.48 | 3e-122 |
X-RAY |
2008-06-17 | GLN | A:152 | A:152 | 84.0 | 0.467 | H | -59.8 | -33.3 | 84.0 | 0.467 | 0.0 |
SO4 HOH |
6.530 6.581 |
N NE2 |
O3 O |
||
GLN | B:152 | B:152 | 96.0 | 0.533 | H | -61.9 | -43.3 | 96.0 | 0.533 | 0.0 |
SO4 HOH |
5.320 5.791 |
N NE2 |
O3 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00492-f1 | 1 | P00492 | 100.0 | 2e-162 | GLN | A:144 | A:144 | 93.0 | 0.517 | H | -60.1 | -44.5 |