Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 133634060 | . | C | A | CCDS14641.1:NM_000194.2:c.610Cat>Aat_NP_000185.1:p.204H>N | Homo sapiens hypoxanthine phosphoribosyltransferase 1 (HPRT1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1bzy | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
1999-06-22 | HIS | A:203 | A:203 | 26.0 | 0.133 | S | -91.5 | 151.0 | 3.0 | 0.015 | 0.118 |
C:P00492:0.113 B:P00492:0.021 |
IMU HOH |
9.607 2.959 |
O CE1 |
N2 O |
|
HIS | B:203 | B:203 | 19.0 | 0.097 | S | -96.2 | 156.5 | 1.0 | 0.005 | 0.092 |
D:P00492:0.087 A:P00492:0.01 |
IMU HOH |
9.597 3.497 |
O CE1 |
N2 O |
||||||||
HIS | C:203 | C:203 | 22.0 | 0.113 | S | -92.2 | 149.4 | 1.0 | 0.005 | 0.108 |
D:P00492:0.015 A:P00492:0.103 |
IMU HOH |
9.598 3.369 |
O ND1 |
N2 O |
||||||||
HIS | D:203 | D:203 | 20.0 | 0.103 | S | -93.2 | 147.2 | 0.0 | 0.0 | 0.103 |
C:P00492:0.005 B:P00492:0.097 |
IMU HOH |
9.583 3.422 |
O ND1 |
N2 O |
||||||||
1hmp | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
1995-06-03 | HIS | A:203 | A:203 | 22.0 | 0.113 | S | -90.0 | 152.5 | 2.0 | 0.01 | 0.103 |
B:P00492:0.103 |
HOH |
3.967 |
CE1 |
O |
|
HIS | B:203 | B:203 | 21.0 | 0.108 | S | -105.3 | 146.1 | 2.0 | 0.01 | 0.098 |
A:P00492:0.097 |
HOH |
3.334 |
CE1 |
O |
||||||||
1z7g | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2005-08-02 | HIS | A:203 | A:203 | 25.0 | 0.128 | S | -94.4 | 153.2 | 7.0 | 0.036 | 0.092 |
B:P00492:0.092 |
HOH |
3.212 |
NE2 |
O |
|
HIS | B:203 | B:203 | 26.0 | 0.133 | S | -93.1 | 158.1 | 7.0 | 0.036 | 0.097 |
A:P00492:0.097 |
HOH |
3.157 |
NE2 |
O |
||||||||
HIS | C:203 | C:203 | 28.0 | 0.144 | S | -93.7 | 152.2 | NA | NA | NA | |||||||||||||
HIS | D:203 | D:203 | 15.0 | 0.077 | S | -93.3 | 156.7 | NA | NA | NA | |||||||||||||
3gep | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | HIS | A:203 | A:203 | 20.0 | 0.103 | S | -107.2 | 148.0 | 5.0 | 0.026 | 0.077 |
B:P00492:0.077 |
HOH |
3.633 |
NE2 |
O |
|
HIS | B:203 | B:203 | 26.0 | 0.133 | S | -105.6 | 150.8 | 8.0 | 0.041 | 0.092 |
A:P00492:0.092 |
HOH |
3.760 |
NE2 |
O |
||||||||
3ggc | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | HIS | A:203 | A:203 | 18.0 | 0.092 | S | -102.4 | 158.9 | 4.0 | 0.021 | 0.071 |
B:P00492:0.072 |
HOH |
3.579 |
NE2 |
O |
|
HIS | B:203 | B:203 | 25.0 | 0.128 | S | -97.6 | 151.1 | 9.0 | 0.046 | 0.082 |
A:P00492:0.082 |
HOH |
3.626 |
NE2 |
O |
||||||||
3ggj | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2009-08-18 | HIS | A:203 | A:203 | 21.0 | 0.108 | S | -101.2 | 155.4 | 6.0 | 0.031 | 0.077 |
B:P00492:0.077 |
HOH |
3.652 |
NE2 |
O |
|
HIS | B:203 | B:203 | 26.0 | 0.133 | S | -103.3 | 156.9 | 8.0 | 0.041 | 0.092 |
A:P00492:0.092 |
25H HOH |
9.956 3.657 |
O CE1 |
N2 O |
||||||||
4rab | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 23.0 | 0.118 | S | -90.9 | 151.8 | 4.0 | 0.021 | 0.097 |
C:P00492:0.026 B:P00492:0.082 |
3L3 HOH |
9.813 3.319 |
O NE2 |
N2 O |
|
HIS | B:203 | B:203 | 15.0 | 0.077 | S | -86.4 | 151.8 | 2.0 | 0.01 | 0.067 |
A:P00492:0.067 |
3L3 HOH |
9.983 3.399 |
O NE2 |
N2 O |
||||||||
HIS | C:203 | C:203 | 15.0 | 0.077 | S | -87.1 | 154.9 | 2.0 | 0.01 | 0.067 |
D:P00492:0.067 A:P00492:0.005 |
3L3 HOH |
9.800 3.393 |
O NE2 |
N2 O |
||||||||
HIS | D:203 | D:203 | 14.0 | 0.072 | S | -87.0 | 153.8 | 1.0 | 0.005 | 0.067 |
C:P00492:0.067 |
3L3 HOH |
9.758 3.563 |
O NE2 |
N2 O |
||||||||
4rac | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 25.0 | 0.128 | S | -85.2 | 151.5 | 4.0 | 0.021 | 0.107 |
C:P00492:0.021 B:P00492:0.092 |
3L4 HOH |
9.906 3.282 |
O CE1 |
N2 O |
|
HIS | B:203 | B:203 | 17.0 | 0.087 | S | -91.0 | 149.6 | 2.0 | 0.01 | 0.077 |
A:P00492:0.072 |
HOH |
3.458 |
CD2 |
O |
||||||||
HIS | C:203 | C:203 | 23.0 | 0.118 | S | -86.5 | 146.4 | 4.0 | 0.021 | 0.097 |
D:P00492:0.087 A:P00492:0.015 |
HOH |
3.537 |
CE1 |
O |
||||||||
HIS | D:203 | D:203 | 22.0 | 0.113 | S | -94.4 | 151.4 | 5.0 | 0.026 | 0.087 |
C:P00492:0.077 B:P00492:0.01 |
HOH |
3.863 |
NE2 |
O |
||||||||
4rad | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 14.0 | 0.072 | S | -89.2 | 156.6 | 3.0 | 0.015 | 0.057 |
B:P00492:0.056 |
3L5 HOH |
9.848 2.845 |
O HD2 |
H23 O |
|
HIS | B:203 | B:203 | 13.0 | 0.067 | S | -87.5 | 159.1 | 1.0 | 0.005 | 0.062 |
A:P00492:0.062 |
3L5 HOH |
9.304 2.701 |
O HE1 |
H24 O |
||||||||
HIS | C:203 | C:203 | 13.0 | 0.067 | S | -93.1 | 158.6 | 2.0 | 0.01 | 0.057 |
D:P00492:0.056 |
3L5 HOH |
9.466 2.661 |
O HE1 |
H23 O |
||||||||
HIS | D:203 | D:203 | 13.0 | 0.067 | S | -86.0 | 151.8 | 1.0 | 0.005 | 0.062 |
C:P00492:0.062 |
3L5 HOH |
9.801 2.949 |
O HE1 |
H24 O |
||||||||
HIS | E:203 | E:203 | 27.0 | 0.138 | S | -86.0 | 154.3 | NA | NA | NA | |||||||||||||
HIS | F:203 | F:203 | 14.0 | 0.072 | S | -81.1 | 155.0 | NA | NA | NA | |||||||||||||
HIS | G:203 | G:203 | 14.0 | 0.072 | S | -85.9 | 148.0 | NA | NA | NA | |||||||||||||
HIS | H:203 | H:203 | 24.0 | 0.123 | S | -87.9 | 146.7 | NA | NA | NA | |||||||||||||
4ran | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 26.0 | 0.133 | S | -81.7 | 150.6 | 3.0 | 0.015 | 0.118 |
C:P00492:0.026 B:P00492:0.103 |
HOH |
4.692 |
N |
O |
|
HIS | B:203 | B:203 | 21.0 | 0.108 | S | -105.6 | 156.3 | 2.0 | 0.01 | 0.098 |
D:P00492:0.01 A:P00492:0.092 |
||||||||||||
HIS | C:203 | C:203 | 22.0 | 0.113 | S | -91.8 | 152.8 | 4.0 | 0.021 | 0.092 |
D:P00492:0.082 A:P00492:0.015 |
HOH |
6.653 |
CE1 |
O |
||||||||
HIS | D:203 | D:203 | 26.0 | 0.133 | S | -85.1 | 154.8 | 3.0 | 0.015 | 0.118 |
C:P00492:0.113 B:P00492:0.015 |
HOH |
4.955 |
N |
O |
||||||||
4rao | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 24.0 | 0.123 | S | -92.3 | 153.9 | 4.0 | 0.021 | 0.102 |
C:P00492:0.021 B:P00492:0.092 |
HOH |
3.752 |
NE2 |
O |
|
HIS | B:203 | B:203 | 15.0 | 0.077 | S | -90.5 | 154.6 | 1.0 | 0.005 | 0.072 |
A:P00492:0.072 |
HOH |
3.343 |
CE1 |
O |
||||||||
HIS | C:203 | C:203 | 16.0 | 0.082 | S | -91.1 | 157.8 | 2.0 | 0.01 | 0.072 |
D:P00492:0.072 |
HOH |
3.465 |
CD2 |
O |
||||||||
HIS | D:203 | D:203 | 23.0 | 0.118 | S | -92.3 | 156.8 | 4.0 | 0.021 | 0.097 |
B:P00492:0.026 C:P00492:0.077 |
HOH |
3.848 |
NE2 |
O |
||||||||
4raq | 1 | P00492 | 100.0 | 3e-161 |
X-RAY |
2015-01-07 | HIS | A:203 | A:203 | 18.0 | 0.092 | S | -85.8 | 151.4 | 1.0 | 0.005 | 0.087 |
C:P00492:0.01 B:P00492:0.087 |
HOH |
3.880 |
NE2 |
O |
|
HIS | B:203 | B:203 | 19.0 | 0.097 | S | -81.9 | 152.6 | 1.0 | 0.005 | 0.092 |
D:P00492:0.005 A:P00492:0.092 |
HOH |
3.777 |
NE2 |
O |
||||||||
HIS | C:203 | C:203 | 16.0 | 0.082 | S | -93.1 | 155.1 | 1.0 | 0.005 | 0.077 |
D:P00492:0.077 A:P00492:0.005 |
HOH |
3.129 |
NE2 |
O |
||||||||
HIS | D:203 | D:203 | 18.0 | 0.092 | S | -89.6 | 153.0 | 2.0 | 0.01 | 0.082 |
C:P00492:0.082 B:P00492:0.01 |
HOH |
5.301 |
N |
O |
||||||||
4ijq | 1 | P00492 | 100.0 | 4e-161 |
X-RAY |
2013-03-27 | HIS | A:209 | A:203 | 24.0 | 0.123 | S | -91.1 | 153.7 | 4.0 | 0.021 | 0.102 |
C:P00492:0.015 B:P00492:0.092 |
HOH |
3.360 |
ND1 |
O |
|
HIS | B:209 | B:203 | 16.0 | 0.082 | S | -92.7 | 150.3 | 2.0 | 0.01 | 0.072 |
D:P00492:0.005 A:P00492:0.072 |
HOH |
3.355 |
NE2 |
O |
||||||||
HIS | C:209 | C:203 | 24.0 | 0.123 | S | -95.0 | 152.0 | 5.0 | 0.026 | 0.097 |
D:P00492:0.082 A:P00492:0.021 |
HOH |
3.832 |
CE1 |
O |
||||||||
HIS | D:209 | D:203 | 23.0 | 0.118 | S | -96.2 | 154.6 | 4.0 | 0.021 | 0.097 |
B:P00492:0.015 C:P00492:0.082 |
HOH |
3.366 |
ND1 |
O |
||||||||
4kn6 | 1 | P00492 | 100.0 | 1e-160 |
X-RAY |
2013-08-14 | HIS | A:202 | A:203 | 24.0 | 0.123 | S | -92.1 | 138.0 | 24.0 | 0.123 | 0.0 |
HOH |
6.432 |
O |
O |
||
6bnj | 1 | P00492 | 99.08 | 6e-160 |
X-RAY |
2017-12-06 | HIS | A:204 | A:203 | 13.0 | 0.067 | S | -87.3 | 157.5 | 1.0 | 0.005 | 0.062 |
B:P00492:0.062 |
WPG HOH |
9.884 3.349 |
O CD2 |
N2 O |
|
HIS | B:204 | B:203 | 14.0 | 0.072 | S | -82.3 | 154.2 | 1.0 | 0.005 | 0.067 |
A:P00492:0.067 |
WPG HOH |
9.896 3.237 |
O CE1 |
N2 O |
||||||||
HIS | C:204 | C:203 | 13.0 | 0.067 | S | -87.1 | 156.9 | 2.0 | 0.01 | 0.057 |
D:P00492:0.056 |
WPG HOH |
9.897 3.360 |
O CE1 |
N2 O |
||||||||
HIS | D:204 | D:203 | 14.0 | 0.072 | S | -86.8 | 157.8 | 2.0 | 0.01 | 0.062 |
B:P00492:0.005 C:P00492:0.056 |
WPG HOH |
9.927 3.255 |
O CD2 |
N2 O |
||||||||
5hia | 1 | P00492 | 99.08 | 8e-160 |
X-RAY |
2017-01-18 | HIS | A:210 | A:203 | 14.0 | 0.072 | S | -85.6 | 156.3 | 1.0 | 0.005 | 0.067 |
B:P00492:0.067 |
YPG HOH |
9.909 3.322 |
O CD2 |
N2 O |
|
HIS | B:210 | B:203 | 14.0 | 0.072 | S | -83.8 | 160.0 | 2.0 | 0.01 | 0.062 |
A:P00492:0.062 |
YPG HOH |
9.899 3.429 |
O CD2 |
N2 O |
||||||||
HIS | C:210 | C:203 | 15.0 | 0.077 | S | -86.8 | 154.4 | 2.0 | 0.01 | 0.067 |
D:P00492:0.067 |
YPG HOH |
9.919 3.481 |
O CD2 |
N2 O |
||||||||
HIS | D:210 | D:203 | 14.0 | 0.072 | S | -89.0 | 155.3 | 2.0 | 0.01 | 0.062 |
C:P00492:0.062 |
YPG HOH |
9.905 3.199 |
O CD2 |
N2 O |
||||||||
5brn | 1 | P00492 | 98.62 | 3e-159 |
X-RAY |
2015-10-14 | HIS | A:204 | A:203 | 14.0 | 0.072 | S | -78.8 | 162.9 | 3.0 | 0.015 | 0.057 |
C:P00492:0.056 |
HOH |
3.482 |
CD2 |
O |
|
HIS | B:204 | B:203 | 27.0 | 0.138 | S | -82.9 | 149.2 | 4.0 | 0.021 | 0.117 |
D:P00492:0.097 C:P00492:0.031 |
HOH |
3.396 |
NE2 |
O |
||||||||
HIS | C:204 | C:203 | 25.0 | 0.128 | S | -117.9 | 154.7 | 14.0 | 0.072 | 0.056 |
A:P00492:0.056 B:P00492:0.005 |
HOH |
3.478 |
CE1 |
O |
||||||||
HIS | D:204 | D:203 | 15.0 | 0.077 | S | -82.8 | 153.6 | 1.0 | 0.005 | 0.072 |
B:P00492:0.072 |
HOH |
3.376 |
CE1 |
O |
||||||||
5bsk | 1 | P00492 | 98.62 | 3e-159 |
X-RAY |
2015-09-23 | HIS | A:204 | A:203 | 13.0 | 0.067 | S | -92.0 | 147.1 | 0.0 | 0.0 | 0.067 |
D:P00492:0.067 |
HOH |
3.477 |
NE2 |
O |
|
HIS | B:204 | B:203 | 22.0 | 0.113 | S | -94.0 | 148.8 | 7.0 | 0.036 | 0.077 |
C:P00492:0.077 |
HOH |
3.533 |
CE1 |
O |
||||||||
HIS | C:204 | C:203 | 13.0 | 0.067 | S | -92.7 | 143.7 | 0.0 | 0.0 | 0.067 |
B:P00492:0.067 |
HOH |
3.554 |
CE1 |
O |
||||||||
HIS | D:204 | D:203 | 26.0 | 0.133 | S | -96.5 | 144.1 | 11.0 | 0.056 | 0.077 |
A:P00492:0.077 |
HOH |
3.523 |
CE1 |
O |
||||||||
5w8v | 1 | P00492 | 100.0 | 7e-159 |
X-RAY |
2017-08-30 | HIS | A:201 | A:203 | 24.0 | 0.123 | S | -91.8 | 157.5 | 4.0 | 0.021 | 0.102 |
C:P00492:0.026 B:P00492:0.077 |
HOH |
3.422 |
CE1 |
O |
|
HIS | B:201 | B:203 | 17.0 | 0.087 | S | -86.0 | 161.4 | 1.0 | 0.005 | 0.082 |
A:P00492:0.082 |
HOH |
3.282 |
CE1 |
O |
||||||||
HIS | C:201 | C:203 | 28.0 | 0.144 | S | -89.7 | 140.3 | 4.0 | 0.021 | 0.123 |
D:P00492:0.082 A:P00492:0.041 |
HOH |
3.146 |
NE2 |
O |
||||||||
HIS | D:201 | D:203 | 17.0 | 0.087 | S | -96.1 | 166.3 | 2.0 | 0.01 | 0.077 |
C:P00492:0.077 |
HOH |
3.485 |
CE1 |
O |
||||||||
1d6n | 1 | P00492 | 99.07 | 6e-157 |
X-RAY |
1999-12-30 | HIS | A:200 | A:203 | 19.0 | 0.097 | S | -89.6 | 116.7 | 19.0 | 0.097 | 0.0 | ||||||
HIS | B:200 | B:203 | 28.0 | 0.144 | S | -97.3 | 104.6 | 28.0 | 0.144 | 0.0 |
HOH |
5.876 |
CE1 |
O |
|||||||||
2vfa | 1 | P20035,P00492 | 80.48 | 3e-122 |
X-RAY |
2008-06-17 | HIS | A:212 | A:212 | 20.0 | 0.103 | S | -103.7 | 148.0 | 6.0 | 0.031 | 0.072 |
B:P20035+P00492:0.072 |
HOH |
6.207 |
CE1 |
O |
|
HIS | B:212 | B:212 | 20.0 | 0.103 | S | -95.1 | 146.9 | 5.0 | 0.026 | 0.077 |
A:P20035+P00492:0.077 |
5GP HOH |
9.825 4.056 |
O CD2 |
N2 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00492-f1 | 1 | P00492 | 100.0 | 2e-162 | HIS | A:204 | A:204 | 11.0 | 0.056 | S | -76.0 | 149.8 |