Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741201 . T A CCDS14659.1:NM_000074.2:c.413tTa>tAa_NP_000065.1:p.138L>* Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 LEU A:23 A:138 7.0 0.041 -56.8 138.8 7.0 0.041 0.0 HOH
 2.674
 CB
 H2
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 LEU A:23 A:138 10.0 0.059 -74.5 149.6 10.0 0.059 0.0
LEU B:23 B:138 12.0 0.071 -78.2 143.8 12.0 0.071 0.0
LEU C:23 C:138 11.0 0.065 -74.6 144.1 11.0 0.065 0.0
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 LEU A:23 A:138 8.0 0.047 -72.8 150.4 8.0 0.047 0.0 NAG
PEG
HOH
 7.180
7.839
2.846
 N
O
O
 O6
C3
O
LEU B:23 B:138 10.0 0.059 -73.7 150.9 10.0 0.059 0.0 NAG
PEG
HOH
 7.264
7.673
2.778
 N
O
O
 O6
O4
O
LEU C:23 C:138 10.0 0.059 -67.8 150.1 10.0 0.059 0.0 NAG
PEG
HOH
 7.265
7.418
2.841
 N
O
O
 O6
O4
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 LEU A:23 A:138 8.0 0.047 -67.0 150.8 8.0 0.047 0.0 NAG
HOH
 7.284
2.843
 N
O
 O5
O
LEU B:23 B:138 8.0 0.047 -73.6 149.6 8.0 0.047 0.0 NAG
HOH
 7.044
2.741
 N
O
 O5
O
LEU C:23 C:138 9.0 0.053 -71.4 151.8 9.0 0.053 0.0 NAG
HOH
 7.196
2.803
 N
O
 O5
O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 LEU A:26 A:138 3.0 0.018 -59.3 153.2 3.0 0.018 0.0 NAG
 7.814
 N
 C1
LEU B:26 B:138 6.0 0.035 -61.4 146.3 6.0 0.035 0.0 NAG
 7.911
 N
 O5
LEU C:26 C:138 4.0 0.024 -76.6 152.2 4.0 0.024 0.0 NAG
 7.947
 N
 O7
LEU D:26 D:138 2.0 0.012 -68.2 145.3 NA NA NA
LEU E:26 E:138 8.0 0.047 -53.8 151.0 NA NA NA
LEU F:26 F:138 1.0 0.006 -80.8 149.2 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 LEU A:19 A:138 9.0 0.053 -71.8 143.7 9.0 0.053 0.0 NAG
HOH
 8.605
9.185
 N
CD1
 C1
O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 LEU A:18 A:138 2.0 0.012 -77.1 157.9 2.0 0.012 0.0 NAG
HOH
 8.751
3.273
 N
O
 C1
O
LEU B:18 B:138 10.0 0.059 -69.9 145.2 10.0 0.059 0.0 NAG
HOH
 8.889
2.923
 N
CB
 C1
O
LEU C:18 C:138 2.0 0.012 -84.8 151.2 2.0 0.012 0.0 NAG
 8.702
 N
 C1

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 LEU A:138 A:138 6.0 0.035 -63.3 146.7