Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741383 . G A CCDS14659.1:NM_000074.2:c.595Ggt>Agt_NP_000065.1:p.199G>S Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 GLY A:84 A:199 93.0 1.0 T 65.0 20.0 93.0 1.0 0.0 HOH
 3.585
 H
 O
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 GLY A:84 A:199 82.0 1.0 T 67.8 23.4 82.0 1.0 0.0
GLY B:84 B:199 78.0 1.0 T 69.2 29.2 78.0 1.0 0.0
GLY C:84 C:199 77.0 1.0 T 67.5 27.8 77.0 1.0 0.0
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 GLY A:84 A:199 80.0 1.0 T 74.0 7.0 80.0 1.0 0.0 PEG
ETE
HOH
 9.301
3.563
4.652
 N
O
N
 O1
OH3
O
GLY B:84 B:199 79.0 1.0 T 72.1 10.0 79.0 1.0 0.0 PEG
ETE
HOH
 8.983
3.714
2.704
 N
N
N
 C1
C12
O
GLY C:84 C:199 80.0 1.0 T 73.6 8.9 80.0 1.0 0.0 PEG
1PE
HOH
 9.402
3.442
4.612
 N
O
N
 O1
C23
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 GLY A:84 A:199 81.0 1.0 T 71.5 11.5 81.0 1.0 0.0 PEG
HOH
 2.943
2.852
 O
N
 O1
O
GLY B:84 B:199 86.0 1.0 T 75.6 3.5 86.0 1.0 0.0 PEG
HOH
 3.522
4.606
 O
N
 O1
O
GLY C:84 C:199 86.0 1.0 T 75.2 1.9 86.0 1.0 0.0 PEG
HOH
 3.638
4.839
 CA
N
 O1
O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 GLY A:87 A:199 82.0 1.0 T 81.6 11.4 43.0 0.573 0.427 H:P25942:0.52
GLY B:87 B:199 84.0 1.0 T 81.6 13.5 84.0 1.0 0.0
GLY C:87 C:199 82.0 1.0 T 88.5 12.1 50.0 0.667 0.333 G:P25942:0.427
GLY D:87 D:199 85.0 1.0 T 82.8 6.4 NA NA NA
GLY E:87 E:199 84.0 1.0 T 78.5 10.9 NA NA NA
GLY F:87 F:199 85.0 1.0 T 77.3 13.9 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 GLY A:80 A:199 83.0 1.0 T 72.8 20.8 83.0 1.0 0.0 HOH
 6.819
 N
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 GLY A:79 A:199 89.0 1.0 T 67.0 23.1 89.0 1.0 0.0 HOH
 4.429
 O
 O
GLY B:79 B:199 90.0 1.0 T 91.6 -5.0 90.0 1.0 0.0 HOH
 2.765
 N
 O
GLY C:79 C:199 87.0 1.0 T 85.2 6.7 87.0 1.0 0.0 HOH
 7.144
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 GLY A:199 A:199 93.0 1.0 T 69.5 10.1