Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 135741420 . C A CCDS14659.1:NM_000074.2:c.632aCc>aAc_NP_000065.1:p.211T>N Homo sapiens CD40 ligand (CD40LG), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aly 1 P29965 100.0 9e-107 X-RAY
 1997-09-17 THR A:96 A:211 83.0 0.593 E -86.3 155.3 19.0 0.136 0.457 A:P29965:0.457
 HOH
 2.284
 HG1
 O
1i9r 1 P29965 100.0 9e-107 X-RAY
 2002-03-20 THR A:96 A:211 111.0 0.793 -114.8 113.9 32.0 0.229 0.564 C:P29965:0.564
THR B:96 B:211 110.0 0.786 -113.6 112.5 30.0 0.214 0.572 A:P29965:0.571
THR C:96 C:211 112.0 0.8 -111.9 116.8 32.0 0.229 0.571 B:P29965:0.571
6w9g 1 P29965 100.0 9e-107 X-RAY
 2020-12-23 THR A:96 A:211 102.0 0.729 -73.5 156.6 23.0 0.164 0.565 C:P29965:0.564
 TRS
TMO
HOH
 3.199
7.497
4.031
 OG1
CG2
OG1
 C1
CAD
O
THR B:96 B:211 109.0 0.779 -75.0 151.3 26.0 0.186 0.593 A:P29965:0.593
 TRS
TMO
HOH
 2.947
7.395
3.987
 OG1
CG2
CG2
 O3
OAE
O
THR C:96 C:211 84.0 0.6 -70.1 156.8 13.0 0.093 0.507 B:P29965:0.507
 TRS
TMO
HOH
 2.823
7.351
4.138
 OG1
CG2
CG2
 O2
CAA
O
7sgm 1 P29965 100.0 9e-107 X-RAY
 2022-02-02 THR A:96 A:211 104.0 0.743 -64.4 156.0 28.0 0.2 0.543 C:P29965:0.543
 HOH
 4.383
 CG2
 O
THR B:96 B:211 116.0 0.829 -58.3 144.9 37.0 0.264 0.565 A:P29965:0.564
 HOH
 3.734
 CB
 O
THR C:96 C:211 111.0 0.793 -67.9 148.0 30.0 0.214 0.579 B:P29965:0.579
 HOH
 4.253
 CG2
 O
3qd6 1 P29965 100.0 1e-106 X-RAY
 2011-02-02 THR A:99 A:211 104.0 0.743 -74.5 132.2 13.0 0.093 0.65 C:P29965:0.65
THR B:99 B:211 111.0 0.793 -99.2 131.1 19.0 0.136 0.657 A:P29965:0.657
THR C:99 C:211 92.0 0.657 -109.2 174.8 14.0 0.1 0.557 B:P29965:0.557
THR D:99 D:211 105.0 0.75 -82.8 140.8 NA NA NA
THR E:99 E:211 106.0 0.757 -63.0 142.8 NA NA NA
THR F:99 F:211 91.0 0.65 -72.1 134.0 NA NA NA
6brb 1 P29965 100.0 5e-103 X-RAY
 2018-12-05 THR A:92 A:211 102.0 0.729 -61.4 151.2 20.0 0.143 0.586 B:None:0.007
A:P29965:0.586
 HOH
 6.143
 OG1
 O
3lkj 1 P29965 100.0 6e-102 X-RAY
 2011-02-02 THR A:91 A:211 167.0 1.0 -67.0 360.0 167.0 1.0 0.0 HOH
 7.522
 N
 O
THR B:91 B:211 111.0 0.793 -98.8 117.3 41.0 0.293 0.5 A:P29965:0.5
 HOH
 6.533
 N
 O
THR C:91 C:211 151.0 1.0 -136.4 360.0 69.0 0.493 0.507 B:P29965:0.586

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29965-f1 1 P29965 100.0 0.0 THR A:211 A:211 108.0 0.771 -74.0 143.3