Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chrX 23801481 . G A CCDS14207.1:NM_002970.2:c.13Gtg>Atg_NP_002961.1:p.5V>M Homo sapiens spermidine/spermine N1-acetyltransferase 1 (SAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2jev 1 P21673 100.0 6e-128 X-RAY
 2007-06-05 VAL A:8 A:5 86.0 0.555 E -131.6 141.9 86.0 0.555 0.0 HOH
 3.678
 CA
 O
VAL B:8 B:5 88.0 0.568 E -126.4 141.8 88.0 0.568 0.0 HOH
 3.950
 CA
 O
2b4d 1 P21673 100.0 8e-128 X-RAY
 2006-01-17 VAL A:5 A:5 63.0 0.406 E -132.8 151.6 63.0 0.406 0.0 HOH
 5.814
 C
 O
2b4d 2 P21673 100.0 8e-128 X-RAY
 2006-01-17 VAL B:5 B:5 62.0 0.4 E -133.0 142.0 62.0 0.4 0.0
2b5g 1 P21673 100.0 8e-128 X-RAY
 2006-01-17 VAL A:5 A:5 58.0 0.374 E -132.5 149.1 58.0 0.374 0.0 HOH
 3.363
 CA
 O
2b5g 2 P21673 100.0 8e-128 X-RAY
 2006-01-17 VAL B:5 B:5 83.0 0.535 E -135.9 143.8 83.0 0.535 0.0 HOH
 3.537
 CA
 O
2f5i 1 P21673 100.0 8e-128 X-RAY
 2005-12-06 VAL A:5 A:5 92.0 0.594 E -117.1 132.8 92.0 0.594 0.0 HOH
 2.865
 CG1
 O
VAL B:5 B:5 89.0 0.574 E -138.2 128.5 89.0 0.574 0.0 HOH
 3.522
 CG1
 O
2g3t 1 P21673 100.0 8e-128 X-RAY
 2006-03-07 VAL A:5 A:5 88.0 0.568 E -133.6 148.5 88.0 0.568 0.0 HOH
 3.203
 CG2
 O
VAL B:5 B:5 71.0 0.458 E -136.1 140.2 NA NA NA
2b3u 1 P21673 99.42 2e-127 X-RAY
 2006-01-17 VAL A:5 A:5 56.0 0.361 E -134.4 146.9 56.0 0.361 0.0 HOH
 3.310
 CA
 O
VAL B:5 B:5 71.0 0.458 E -135.3 143.7 71.0 0.458 0.0 HOH
 3.563
 CA
 O
2b3v 1 P21673 99.42 2e-127 X-RAY
 2006-01-17 VAL A:5 A:5 78.0 0.503 E -126.7 132.9 78.0 0.503 0.0 HOH
 3.571
 CA
 O
2b4b 1 P21673 99.42 2e-127 X-RAY
 2006-01-17 VAL A:5 A:5 74.0 0.477 E -127.5 140.3 74.0 0.477 0.0 HOH
 9.668
 N
 O
VAL B:5 B:5 54.0 0.348 E -131.6 146.8 54.0 0.348 0.0 HOH
 9.732
 CA
 O
2b58 1 P21673 99.42 2e-127 X-RAY
 2006-01-24 VAL A:5 A:5 82.0 0.529 E -123.1 135.0 82.0 0.529 0.0 HOH
 3.526
 CA
 O
2fxf 1 P21673 100.0 5e-127 X-RAY
 2006-02-14 VAL A:4 A:5 82.0 0.529 E -123.3 143.8 82.0 0.529 0.0 HOH
 3.466
 CG2
 O
VAL B:4 B:5 90.0 0.581 E -129.4 137.9 90.0 0.581 0.0 HOH
 3.673
 CA
 O
3bj7 1 P48026 96.49 5e-124 X-RAY
 2008-09-16 LYS A:5 A:5 120.0 0.6 E -133.9 142.3 120.0 0.6 0.0 HOH
 3.651
 CA
 O
LYS B:5 B:5 117.0 0.585 E -133.3 127.6 117.0 0.585 0.0 HOH
 3.052
 NZ
 O
LYS C:5 C:5 119.0 0.595 E -129.7 134.7 NA NA NA
LYS D:5 D:5 128.0 0.64 E -133.6 127.8 NA NA NA
3bj8 1 P48026 96.49 5e-124 X-RAY
 2008-09-16 LYS A:5 A:5 118.0 0.59 E -147.5 129.2 118.0 0.59 0.0 HOH
 3.472
 CA
 O
LYS B:5 B:5 154.0 0.77 E -127.7 126.4 154.0 0.77 0.0 HOH
 3.161
 CG
 O
LYS C:5 C:5 151.0 0.755 E -131.5 132.8 NA NA NA
LYS D:5 D:5 151.0 0.755 E -131.1 125.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21673-f1 1 P21673 100.0 3e-128 VAL A:5 A:5 79.0 0.51 E -125.8 136.2