Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chrX | 24906235 | . | C | A | CCDS14214.1:NM_016937.3:c.4142cCa>cAa_NP_058633.2:p.1381P>Q | Homo sapiens DNA polymerase alpha 1, catalytic subunit (POLA1), transcript variant 2, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5exr | 3 | P09884 | 99.91 | 0.0 |
X-RAY |
2016-03-23 | PRO | C:1047 | C:1381 | 61.0 | 0.421 | E | -34.7 | 130.7 | 38.0 | 0.262 | 0.159 |
D:Q14181:0.159 |
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PRO | G:1047 | G:1381 | 64.0 | 0.441 | E | -37.2 | 132.2 | NA | NA | NA | |||||||||||||
7opl | 1 | P09884 | 100.0 | 0.0 |
EM |
2021-11-10 | PRO | A:1089 | A:1381 | 51.0 | 0.352 | E | -61.7 | 145.4 | 32.0 | 0.221 | 0.131 |
B:Q14181:0.131 |
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4y97 | 2 | P09884 | 100.0 | 5e-125 |
X-RAY |
2015-04-15 | PRO | B:117 | B:1381 | 69.0 | 0.476 | E | -60.8 | 132.1 | 50.0 | 0.345 | 0.131 |
A:Q14181:0.131 |
HOH |
2.846 |
O |
O |
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PRO | D:117 | D:1381 | 70.0 | 0.483 | E | -61.2 | 132.7 | NA | NA | NA | |||||||||||||
PRO | F:117 | F:1381 | 71.0 | 0.49 | E | -60.1 | 132.3 | NA | NA | NA | |||||||||||||
PRO | H:117 | H:1381 | 69.0 | 0.476 | E | -60.5 | 131.3 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p09884-f1 | 1 | P09884 | 100.0 | 0.0 | PRO | A:1381 | A:1381 | 62.0 | 0.428 | E | -61.1 | 124.4 |